RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 DYNC1H1Q14204 4646 aaKnown RBP13.9□□□□□ -0.18
CLN6-212ENST00000636020 PKHD1P08F94 4074 aa13.9□□□□□ -0.19
CLN6-212ENST00000636020 A0A1W2PPE3 182 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 NPIPB11E5RHQ5 1161 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 GYG2O15488 501 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 GATBO75879 557 aaKnown RBP13.89□□□□□ -0.19
CLN6-212ENST00000636020 CYB5AP00167 134 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 IL1AP01583 271 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 GLP1RP43220 463 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 RPS7P62081 194 aaKnown RBP13.89□□□□□ -0.19
CLN6-212ENST00000636020 SCN1BQ07699 218 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 ATXN7L3Q14CW9 347 aaPredicted RBP13.89□□□□□ -0.19
CLN6-212ENST00000636020 LTC4SQ16873 150 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 DNAL1Q4LDG9 190 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 Q6P435 159 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 CD300LDQ6UXZ3 194 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 LINC00322Q6ZN03 302 aaPredicted RBP13.89□□□□□ -0.19
CLN6-212ENST00000636020 ANKRD13BQ86YJ7 626 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 ZNF565Q8N9K5 539 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 OR13A1Q8NGR1 328 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 RNF166Q96A37 237 aaPredicted RBP13.89□□□□□ -0.19
CLN6-212ENST00000636020 TMED9Q9BVK6 235 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 CHST5Q9GZS9 411 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 PLEKHA1Q9HB21 404 aa13.89□□□□□ -0.19
CLN6-212ENST00000636020 MRPS28Q9Y2Q9 187 aaKnown RBP13.89□□□□□ -0.19
CLN6-212ENST00000636020 ZNF736B4DX44 427 aaPredicted RBP13.88□□□□□ -0.19
CLN6-212ENST00000636020 SLC33A1O00400 549 aaPredicted RBP13.88□□□□□ -0.19
CLN6-212ENST00000636020 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
CLN6-212ENST00000636020 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
CLN6-212ENST00000636020 ZNF44P15621 663 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 FSTP19883 344 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 HTR1FP30939 366 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 RBP2P50120 134 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 ATP1B3P54709 279 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 MICAQ29983 383 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 RFESDQ8TAC1 157 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
CLN6-212ENST00000636020 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 APOL4Q9BPW4 351 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 NIPSNAP1Q9BPW8 284 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 ELOVL1Q9BW60 279 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 SPAG4Q9NPE6 437 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 NDE1Q9NXR1 346 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 MAGEL2Q9UJ55 1249 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 TMEM14AQ9Y6G1 99 aa13.88□□□□□ -0.19
CLN6-212ENST00000636020 DNAH6Q9C0G6 4158 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 H3BN98 237 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 MAGEB4O15481 346 aaPredicted RBP13.87□□□□□ -0.19
CLN6-212ENST00000636020 BRI3O95415 125 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 C21orf33P30042 268 aaPredicted RBP13.87□□□□□ -0.19
CLN6-212ENST00000636020 APOFQ13790 326 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 PLEKHG7Q6ZR37 379 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 DEFB107AQ8IZN7 70 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 CHST4Q8NCG5 386 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 DNAAF1Q8NEP3 725 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 THAP7Q9BT49 309 aaPredicted RBP13.87□□□□□ -0.19
CLN6-212ENST00000636020 SNX5Q9Y5X3 404 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 CEPT1Q9Y6K0 416 aa13.87□□□□□ -0.19
CLN6-212ENST00000636020 IGKV1-12A0A0C4DH73 117 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 IGKV1D-12P01611 117 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 PDZK1IP1Q13113 114 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 MINDY2Q8NBR6 621 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 OR10A7Q8NGE5 316 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 OR51T1Q8NGJ9 327 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 RTN4IP1Q8WWV3 396 aaPredicted RBP13.86□□□□□ -0.19
CLN6-212ENST00000636020 RSRP1Q9BUV0 290 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 NCOR1P1Q9H4R4 102 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 ZCCHC4Q9H5U6 513 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 KIF25Q9UIL4 384 aa13.86□□□□□ -0.19
CLN6-212ENST00000636020 MEIKINA0A087WXM9 373 aa13.85□□□□□ -0.19
CLN6-212ENST00000636020 TRAV41A0A0B4J266 112 aa13.85□□□□□ -0.19
CLN6-212ENST00000636020 SYT7O43581 403 aa13.85□□□□□ -0.19
CLN6-212ENST00000636020 SERPINA3P01011 423 aa13.85□□□□□ -0.19
CLN6-212ENST00000636020 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
CLN6-212ENST00000636020 SLC2A2P11168 524 aaPredicted RBP13.85□□□□□ -0.19
CLN6-212ENST00000636020 MTCP1P56278 107 aa13.85□□□□□ -0.19
CLN6-212ENST00000636020 GINS1Q14691 196 aa13.85□□□□□ -0.19
CLN6-212ENST00000636020 FLYWCH2Q96CP2 140 aaKnown RBP13.85□□□□□ -0.19
CLN6-212ENST00000636020 MRM2Q9UI43 246 aaKnown RBP13.85□□□□□ -0.19
CLN6-212ENST00000636020 IGKV1-9A0A0C4DH69 117 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 CCDC182A6NF36 153 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 DEGS1O15121 323 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 ARPC2O15144 300 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 KDM4BO94953 1096 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 HMGN1P05114 100 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 ODF4Q2M2E3 257 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 ZNF322Q6U7Q0 402 aaPredicted RBP13.84□□□□□ -0.19
CLN6-212ENST00000636020 GTSCR1Q86UQ5 136 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 YIPF7Q8N8F6 280 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 LRGUKQ96M69 825 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 THTPAQ9BU02 230 aa13.84□□□□□ -0.19
CLN6-212ENST00000636020 FAT2Q9NYQ8 4349 aa13.83□□□□□ -0.19
CLN6-212ENST00000636020 H0Y980 276 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 ARPC1BO15143 372 aaKnown RBP13.83□□□□□ -0.2
CLN6-212ENST00000636020 DEDDO75618 318 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 HSD17B1P14061 328 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 SSTR5P35346 364 aa13.83□□□□□ -0.2
CLN6-212ENST00000636020 MAGEA2P43356 314 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms