RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 UEVLDQ8IX04 471 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 NOXO1Q8NFA2 376 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 SF3B5Q9BWJ5 86 aaKnown RBP13.29□□□□□ -0.28
CLN8-209ENST00000635970 RBM24Q9BX46 236 aaKnown RBP13.29□□□□□ -0.28
CLN8-209ENST00000635970 AGPAT2O15120 278 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 VAMP5O95183 116 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 HTR3BO95264 441 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 NR2C1P13056 603 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 RAB5AP20339 215 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 BLVRBP30043 206 aaPredicted RBP13.29□□□□□ -0.28
CLN8-209ENST00000635970 AWAT1Q58HT5 328 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 SLC25A47Q6Q0C1 308 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 S100A13Q99584 98 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 NIT2Q9NQR4 276 aa13.29□□□□□ -0.28
CLN8-209ENST00000635970 TRAF3IP2O43734 574 aaPredicted RBP13.28□□□□□ -0.28
CLN8-209ENST00000635970 KNG1P01042 644 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 PGA4P0DJD7 388 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 PGA3P0DJD8 388 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 ZNF43P17038 809 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 P2RY1P47900 373 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 FABP9Q0Z7S8 132 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 KISS1Q15726 138 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 MIDNQ504T8 468 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 RTN4RL2Q86UN3 420 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 WDFY1Q8IWB7 410 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 LINC00469Q8N7U9 141 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 OR6X1Q8NH79 312 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 PP6455Q8WZ26 134 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 OXGR1Q96P68 337 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 SPACA5Q96QH8 159 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 HECTD1Q9ULT8 2610 aa13.28□□□□□ -0.28
CLN8-209ENST00000635970 LINC00587B1AMM8 73 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 AP4M1O00189 453 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 SDCBPO00560 298 aaPredicted RBP13.27□□□□□ -0.28
CLN8-209ENST00000635970 GPR137BO60478 399 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 MRPL33O75394 65 aaKnown RBP13.27□□□□□ -0.28
CLN8-209ENST00000635970 IFNA17P01571 189 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 IGLV3-1P01715 115 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 GLAP06280 429 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 ACKR3P25106 362 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 CLDN17P56750 224 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 FAM27E3Q08E93 113 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 FBXL19-AS1Q494R0 122 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 GGNBP1Q5YKI7 109 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 Q6ZSR3 168 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 ZNF100Q8IYN0 542 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 LRTM2Q8N967 370 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 SEMA6DQ8NFY4 1073 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 GALNT14Q96FL9 552 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 FAM71F1Q96KD3 344 aaPredicted RBP13.27□□□□□ -0.28
CLN8-209ENST00000635970 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 TMPRSS5Q9H3S3 457 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 PRR13Q9NZ81 148 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 PLA2G2EQ9NZK7 142 aa13.27□□□□□ -0.28
CLN8-209ENST00000635970 DCHS2Q6V1P9 2916 aa13.27□□□□□ -0.29
CLN8-209ENST00000635970 A0A0U1RQV5 110 aa13.27□□□□□ -0.29
CLN8-209ENST00000635970 SNRNP70P08621 437 aaKnown RBP13.27□□□□□ -0.29
CLN8-209ENST00000635970 RNASE6Q93091 150 aaKnown RBP13.27□□□□□ -0.29
CLN8-209ENST00000635970 TMEM45BQ96B21 275 aa13.27□□□□□ -0.29
CLN8-209ENST00000635970 APH1AQ96BI3 265 aa13.27□□□□□ -0.29
CLN8-209ENST00000635970 EMC6Q9BV81 110 aa13.27□□□□□ -0.29
CLN8-209ENST00000635970 UNKLQ9H9P5 680 aaKnown RBP13.27□□□□□ -0.29
CLN8-209ENST00000635970 PNRC2Q9NPJ4 139 aaKnown RBP13.27□□□□□ -0.29
CLN8-209ENST00000635970 IGKV1-9A0A0C4DH69 117 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 LOC102725191A0A1B0GVB3 256 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 M0R036 132 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 GATCO43716 136 aaKnown RBP13.26□□□□□ -0.29
CLN8-209ENST00000635970 LMO1P25800 156 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 CCKARP32238 428 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 CAMLGP49069 296 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 LSM6P62312 80 aaKnown RBP13.26□□□□□ -0.29
CLN8-209ENST00000635970 IL13RA2Q14627 380 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 HIST3H3Q16695 136 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 AAED1Q7RTV5 226 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 SLC16A13Q7RTY0 426 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 FOXRED2Q8IWF2 684 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 ZNF283Q8N7M2 679 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 ZNF2Q9BSG1 426 aaPredicted RBP13.26□□□□□ -0.29
CLN8-209ENST00000635970 SUCNR1Q9BXA5 334 aa13.26□□□□□ -0.29
CLN8-209ENST00000635970 EIF5A2Q9GZV4 153 aaKnown RBP13.26□□□□□ -0.29
CLN8-209ENST00000635970 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 A0A1W2PP11 408 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 WRBO00258 174 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 FOXG1P55316 489 aaPredicted RBP13.25□□□□□ -0.29
CLN8-209ENST00000635970 TSPO2Q5TGU0 170 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 OR8G5Q8NG78 346 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 SPACA1Q9HBV2 294 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 SLC7A10Q9NS82 523 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 C19orf12Q9NSK7 152 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 V9GYS6 101 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 UMAD1C9J7I0 102 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 IGFBP2P18065 325 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 DTYMKP23919 212 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 SULT1A1P50225 295 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 KRBOX4Q5JUW0 171 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms