RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 PIGMQ9H3S5 423 aa16.62■□□□□ 0.25
TREX1-205ENST00000625293 RASL12Q9NYN1 266 aa16.62■□□□□ 0.25
TREX1-205ENST00000625293 MBD2Q9UBB5 411 aa16.62■□□□□ 0.25
TREX1-205ENST00000625293 A0A0G2JNJ9 132 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 IGHV3-64DA0A0J9YX35 117 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 NXPH2O95156 264 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 LYL1P12980 280 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 PLA2G2AP14555 144 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 NKX6-1P78426 367 aaPredicted RBP16.61■□□□□ 0.25
TREX1-205ENST00000625293 ABCA11PQ4W5N1 156 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 RGS7BPQ6MZT1 257 aaPredicted RBP16.61■□□□□ 0.25
TREX1-205ENST00000625293 THAP6Q8TBB0 222 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 RNF126Q9BV68 326 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 TMEM165Q9HC07 324 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 Q9UFV3 132 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 PRR14LQ5THK1 2151 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 H0YIZ8 118 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 M0R1B8 84 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 B3GALNT1O75752 331 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 TK1P04183 234 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 ZNF250P15622 560 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 HLA-DRB3P79483 266 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 PAN3Q58A45 887 aaKnown RBP16.61■□□□□ 0.25
TREX1-205ENST00000625293 CLLU1Q5K131 121 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 ACOT7LQ6ZUV0 252 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 OR8H3Q8N146 312 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 LRTM2Q8N967 370 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 PLPPR1Q8TBJ4 325 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 SNRNP40Q96DI7 357 aaKnown RBP16.61■□□□□ 0.25
TREX1-205ENST00000625293 MUCL1Q96DR8 90 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 CABLES2Q9BTV7 478 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 METTL8Q9H825 291 aaKnown RBP16.61■□□□□ 0.25
TREX1-205ENST00000625293 MSL2Q9HCI7 577 aa16.61■□□□□ 0.25
TREX1-205ENST00000625293 GCN1Q92616 2671 aaKnown RBP16.6■□□□□ 0.25
TREX1-205ENST00000625293 LINC00862A6NCI5 91 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 SIRPB1O00241 398 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 HOXB5P09067 269 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 CCKARP32238 428 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 FAM27E3Q08E93 113 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 PHLDA2Q53GA4 152 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 PRAMEF6Q5VXH4 476 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 WDR82Q6UXN9 313 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 GFRALQ6UXV0 394 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 ZNF497Q6ZNH5 498 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 ZNF826PQ6ZT77 177 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 MRGPRGQ86SM5 289 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 OR5T2Q8NGG2 359 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 OR4A4PQ8NGN8 299 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 OR11L1Q8NGX0 322 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 SUCNR1Q9BXA5 334 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 KCNIP3Q9Y2W7 256 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 SHANK1Q9Y566 2161 aa16.6■□□□□ 0.25
TREX1-205ENST00000625293 BET1O15155 118 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 DIRAS3O95661 229 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 OR5AC1P0C628 307 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 RCC1P18754 421 aaPredicted RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 BMP5P22003 454 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 GNRHRP30968 328 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 GLRXP35754 106 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 C22orf34Q6ZV56 151 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 SLC51BQ86UW2 128 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 LDLRAD3Q86YD5 345 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 SYT3Q9BQG1 590 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 ASF1BQ9NVP2 202 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 AUP1Q9Y679 476 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 TENM4Q6N022 2769 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 HELZ2Q9BYK8 2649 aaKnown RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 TUBAL3A6NHL2 446 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 SH2D1BO14796 132 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 PTBP3O95758 552 aaKnown RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 HAND1O96004 215 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 LMO1P25800 156 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 AP2S1P53680 142 aaPredicted RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 RND3P61587 244 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 ATXN7L3Q14CW9 347 aaPredicted RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 MOB1BQ7L9L4 216 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 LRP11Q86VZ4 500 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 CCDC71LQ8N9Z2 235 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 MSI2Q96DH6 328 aaKnown RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 VRK1Q99986 396 aaPredicted RBP16.59■□□□□ 0.25
TREX1-205ENST00000625293 PCDHB10Q9UN67 800 aa16.59■□□□□ 0.25
TREX1-205ENST00000625293 COL12A1Q99715 3063 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 ANKRD34BA5PLL1 514 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 NPIPB11E5RHQ5 1161 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 H7C1Q1 480 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 WNT9BO14905 357 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 IGHV3-13P01766 116 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 CRYAAP02489 173 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 PRSS54Q6PEW0 395 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 LIAT1Q6ZQX7 453 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 FAM185AQ8N0U4 392 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 MRPL24Q96A35 216 aaKnown RBP16.58■□□□□ 0.24
TREX1-205ENST00000625293 GSX2Q9BZM3 304 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 WIPI2Q9Y4P8 454 aa16.58■□□□□ 0.24
TREX1-205ENST00000625293 IGKV1D-13A0A0B4J2D9 117 aa16.57■□□□□ 0.24
TREX1-205ENST00000625293 BCL2L11O43521 198 aa16.57■□□□□ 0.24
TREX1-205ENST00000625293 IGKV1-13P0DP09 117 aa16.57■□□□□ 0.24
TREX1-205ENST00000625293 CD200P41217 278 aa16.57■□□□□ 0.24
TREX1-205ENST00000625293 SP6Q3SY56 376 aa16.57■□□□□ 0.24
TREX1-205ENST00000625293 GGNBP1Q5YKI7 109 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms