RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 C1orf174Q8IYL3 243 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 SLC39A11Q8N1S5 342 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 SIGLECL1Q8N7X8 197 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 ZNF665Q9H7R5 613 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 TMEM160Q9NX00 188 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 CDC42EP3Q9UKI2 254 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 GRIFINA4D1Z8 144 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 RENP00797 406 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 TYMSP04818 313 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 VSIG8P0DPA2 414 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 FAHP16930 419 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 SNU13P55769 128 aaKnown RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 MTCP1P56278 107 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 CTXN1P60606 82 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 RHOGP84095 191 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 RUNX1Q01196 453 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 CYP2G1PQ6ZSU1 146 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 HSD11B1LQ7Z5J1 315 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 BAGE3Q86Y29 109 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 AMELYQ99218 206 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 ATP5SQ99766 215 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 PARLQ9H300 379 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 C6orf106Q9H6K1 298 aaPredicted RBP6.89□□□□□ -1.31
VPS11-209ENST00000622309 LRP12Q9Y561 859 aa6.89□□□□□ -1.31
VPS11-209ENST00000622309 DENND4CQ5VZ89 1909 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 IGHV1-69-2A0A0G2JMI3 117 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 GAGE12BA1L429 117 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 ZNF878C9JN71 531 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 TRAF3IP2O43734 574 aaPredicted RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 LDB3O75112 727 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 PITX3O75364 302 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 MPZL1O95297 269 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 MPIG6BO95866 241 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 C8AP07357 584 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 TSPOP30536 169 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 GATA4P43694 442 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 SP6Q3SY56 376 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 PLPP4Q5VZY2 271 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 OTPQ5XKR4 325 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CPEB2Q7Z5Q1 589 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 RTN4RL2Q86UN3 420 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CADM4Q8NFZ8 388 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 RLN3Q8WXF3 142 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 PSMF1Q92530 271 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 DPF1Q92782 380 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 TMEM186Q96B77 213 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 FAM103A1Q9BTL3 118 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 NKX2-4Q9H2Z4 354 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 ZNF160Q9HCG1 818 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 IL23AQ9NPF7 189 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 MRPS16Q9Y3D3 137 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 DOCK8Q8NF50 2099 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CHD9Q3L8U1 2897 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 SPTBN5Q9NRC6 3674 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 CXCL10P02778 98 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CD99P14209 185 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 HIST1H1TP22492 207 aaPredicted RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 GNRHRP30968 328 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 DUSP3P51452 185 aaPredicted RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 POLR2LP62875 67 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 LCN2P80188 198 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 RBPJQ06330 500 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 TRMT12Q53H54 448 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 FAM78BQ5VT40 261 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 ABHD12BQ7Z5M8 362 aaPredicted RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 SLC22A24Q8N4F4 322 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 OR5C1Q8NGR4 320 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CYB5D2Q8WUJ1 264 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 NICN1Q9BSH3 213 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 ZDHHC11Q9H8X9 412 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 IL21Q9HBE4 155 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 MMP25Q9NPA2 562 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 SS18L2Q9UHA2 77 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 B9D1Q9UPM9 204 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 OR51B4Q9Y5P0 310 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 DUXBA0A1W2PPF3 345 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 HELTA6NFD8 242 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 LRRC3CA6NJW4 275 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 ZNF732B4DXR9 585 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 KLRC4-KLRK1H3BQV0 150 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CLEC3AO75596 197 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 HIST1H1DP16402 221 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 GABRA3P34903 492 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 RPL23P62829 140 aaKnown RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 NTHL1P78549 312 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 EXT1Q16394 746 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 ABCA11PQ4W5N1 156 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 KCTD18Q6PI47 426 aaPredicted RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 LYZL2Q7Z4W2 148 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.88□□□□□ -1.31
VPS11-209ENST00000622309 TMEM217Q8N7C4 229 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 SLC38A9Q8NBW4 561 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 OTOSQ8NHW6 89 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 WDYHV1Q96HA8 205 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 CHRNA10Q9GZZ6 450 aa6.88□□□□□ -1.31
VPS11-209ENST00000622309 PGPEP1Q9NXJ5 209 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms