RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	PLA2G3	Q9NZ20	509 aa		12.43	□□□□□ -0.42
SYNRG-231	ENST00000622045	NPS	P0C0P6	89 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	RTP5	Q14D33	572 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF787	Q6DD87	383 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	BTNL3	Q6UXE8	466 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	CCDC71L	Q8N9Z2	235 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	ELOVL1	Q9BW60	279 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	FUT9	Q9Y231	359 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	C2CD4D	B7Z1M9	353 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045		M0R143	59 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	HMGB3	O15347	200 aa	Known RBP	12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	CA11	O75493	328 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	KCNMB1	Q16558	191 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	RHBDD2	Q6NTF9	364 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	C16orf82	Q7Z2V1	217 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	GPR137C	Q8N3F9	429 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	ADPRHL1	Q8NDY3	354 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	RBMXL1	Q96E39	390 aa	Known RBP	12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045		A0A1W2PR80	420 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	CHST1	O43916	411 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	SCRG1	O75711	98 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	OR7C1	O76099	320 aa	Predicted RBP	12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	GLB1	P16278	677 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	GNRHR	P30968	328 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	PHYHD1	Q5SRE7	291 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	BEND2	Q8NDZ0	799 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	UCN2	Q96RP3	112 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	PCGF1	Q9BSM1	259 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	ST3GAL6	Q9Y274	331 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045		V9GYS6	101 aa		12.42	□□□□□ -0.42
SYNRG-231	ENST00000622045	C3orf85	A0A1B0GTC6	90 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZFP36L1	Q07352	338 aa	Known RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	SYT13	Q7L8C5	426 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	RPUSD4	Q96CM3	377 aa	Known RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	RCC1L	Q96I51	464 aa	Known RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	CDH20	Q9HBT6	801 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	CNOT4	O95628	575 aa	Known RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	HBE1	P02100	147 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	ENDOG	Q14249	297 aa	Known RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	IZUMO4	Q1ZYL8	232 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	IL22RA1	Q8N6P7	574 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045		B4DEV8	164 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	TP53I11	O14683	189 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	OPN1MW	P04001	364 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	OPN1MW2	P0DN77	364 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	OPN1MW3	P0DN78	364 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	CD33	P20138	364 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	GZMH	P20718	246 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	RND2	P52198	227 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	MALL	Q13021	153 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	CNN3	Q15417	329 aa	Known RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	SPACA9	Q96E40	222 aa	Predicted RBP	12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	SDF2L1	Q9HCN8	221 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	RPRM	Q9NS64	109 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045	GOLT1B	Q9Y3E0	138 aa		12.41	□□□□□ -0.42
SYNRG-231	ENST00000622045		A0A1B0GUS0	222 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	TIAF1	O95411	115 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF705D	P0CH99	300 aa	Predicted RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF705B	P0CI00	300 aa	Predicted RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ELL	P55199	621 aa	Predicted RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	SLC25A53	Q5H9E4	307 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	SPSB1	Q96BD6	273 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	WNT16	Q9UBV4	365 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	MARCH11	A6NNE9	402 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	PPP5D1	E7EU14	171 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	PATE4	P0C8F1	98 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	BCL2	P10415	239 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	CTSS	P25774	331 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	HIST3H3	Q16695	136 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF100	Q8IYN0	542 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	RASL10B	Q96S79	203 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	SMIM7	Q9BQ49	75 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	LYRM2	Q9NU23	88 aa	Predicted RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	FER1L5	A0AVI2	2057 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	TRBV24-1	A0A075B6N3	115 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	MPPED1	O15442	326 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	DTYMK	P23919	212 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	CEACAM6	P40199	344 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	WNT5A	P41221	380 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	PTGDS	P41222	190 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	NXPH1	P58417	271 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	RPS18	P62269	152 aa	Known RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	GNB2	P62879	340 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ODF3L1	Q8IXM7	274 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	OSR2	Q8N2R0	312 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	PIGC	Q92535	297 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	ZNF837	Q96EG3	531 aa	Predicted RBP	12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	TMEM208	Q9BTX3	173 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	MTCH2	Q9Y6C9	303 aa		12.4	□□□□□ -0.42
SYNRG-231	ENST00000622045	TRDC	B7Z8K6	153 aa		12.39	□□□□□ -0.43
SYNRG-231	ENST00000622045	FGF5	P12034	268 aa		12.39	□□□□□ -0.43
SYNRG-231	ENST00000622045	HERPUD1	Q15011	391 aa		12.39	□□□□□ -0.43
SYNRG-231	ENST00000622045	TESK1	Q15569	626 aa		12.39	□□□□□ -0.43
SYNRG-231	ENST00000622045	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.39	□□□□□ -0.43
SYNRG-231	ENST00000622045	C10orf142	B7Z368	130 aa		12.39	□□□□□ -0.43

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