RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SLC25A17O43808 307 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 GZMBP10144 247 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 FOLR2P14207 255 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 RPL13AP40429 203 aaKnown RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 SHBQ15464 509 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 POC1AQ8NBT0 407 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 HOXB9P17482 250 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-214ENST00000620676 BCL3P20749 454 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 Q6ZSR6 202 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 WNT5BQ9H1J7 359 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CHODLQ9H9P2 273 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 CUTCQ9NTM9 273 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 ELOVL5Q9NYP7 299 aa4.43□□□□□ -1.7
VPS13D-214ENST00000620676 TRBV5-3A0A0A0MS03 114 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SERF1AO75920 110 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 CA1P00915 261 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PNKDQ8N490 385 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 FAM117AQ9C073 453 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SF3B6Q9Y3B4 125 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PIN1P1O15428 100 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MFAP2P55001 183 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PNRC1Q12796 327 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF683Q8IZ20 524 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 OR1N2Q8NGR9 330 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 AMELYQ99218 206 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 HSD17B10Q99714 261 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 TUBD1Q9UJT1 453 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PCM1Q15154 2024 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SERPINE3A8MV23 424 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 CD55P08174 381 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF776Q68DI1 518 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 HEPN1Q6WQI6 88 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 LHFPL4Q7Z7J7 247 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 C5P01031 1676 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 A0A0A6YYD5 115 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 HRKO00198 91 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 CST6Q15828 149 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 OTOSQ8NHW6 89 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 C5orf66Q9H5L9 145 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 DPRXA6NFQ7 191 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PATE4P0C8F1 98 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 GPR12P47775 334 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ICAM4Q14773 271 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MRPL43Q8N983 215 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 NUP205Q92621 2012 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ANAPC16Q96DE5 110 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ULBP2Q9BZM5 246 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 H3BTX0 84 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 RSPO2Q6UXX9 243 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 C16orf47Q6ZP98 133 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 OR4B1Q8NGF8 309 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 A6NCN8 305 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PITX3O75364 302 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 RPS21P63220 83 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MRPL49Q13405 166 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ACSF3Q4G176 576 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 CRISPLD2Q9H0B8 497 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 IL36RNQ9UBH0 155 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SOX21Q9Y651 276 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1B0GWB2 263 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 HOXC13P31276 330 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MNX1P50219 401 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 HYAL1Q12794 435 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 IL24Q13007 206 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 KISS1Q15726 138 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 C16orf52Q8NHV5 167 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ZC2HC1AQ96GY0 325 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 NPIPB8E9PQR5 432 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 NPIPB7O75200 414 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SELENOVP59797 346 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 DUSP8Q13202 625 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MRPL58Q14197 206 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ARRDC3Q96B67 414 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 GUCD1Q96NT3 240 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SSBP4Q9BWG4 385 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 RNF208Q9H0X6 261 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 BCL2L10Q9HD36 194 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SDK1Q7Z5N4 2213 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1W2PRS3 328 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 TMEM215Q68D42 235 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 CD300LDQ6UXZ3 194 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF788Q6ZQV5 615 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 PERPQ96FX8 193 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MENTQ9BUN1 341 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 MFRPQ9BY79 579 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 BARX1Q9HBU1 254 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 TIAM2Q8IVF5 1701 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1B0GW15 77 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SRP19P09132 144 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 ESDP10768 282 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 RAB9AP51151 201 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 KLF3P57682 345 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 DEFB132Q7Z7B7 95 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 OR10AG1Q8NH19 301 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 SPPL3Q8TCT6 385 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 RNASE8Q8TDE3 154 aaKnown RBP4.42□□□□□ -1.7
VPS13D-214ENST00000620676 DEFB118Q96PH6 123 aa4.42□□□□□ -1.7
VPS13D-214ENST00000620676 S1PR5Q9H228 398 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms