RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ZNF519Q8TB69 540 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 PTPMT1Q8WUK0 201 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 TTC28Q96AY4 2481 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 HSPB9Q9BQS6 159 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 MAP1LC3BQ9GZQ8 125 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 LIME1Q9H400 295 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 SLC25A22Q9H936 323 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 SPINK4O60575 86 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 GZMHP20718 246 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 COL9A1P20849 921 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 NSDHLQ15738 373 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 VHLLQ6RSH7 139 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 OR10S1Q8NGN2 331 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 RNASE8Q8TDE3 154 aaKnown RBP8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 ZNF318Q5VUA4 2279 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 PLXNA2O75051 1894 aa8.5□□□□□ -1.05
TNFAIP3-210ENST00000620204 TRBV24-1A0A075B6N3 115 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 C3orf85A0A1B0GTC6 90 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 A0A1W2PNR3 127 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 C5orf63A6NC05 138 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 PROB1E7EW31 1015 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 TP53I11O14683 189 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 TNFRSF10CO14798 259 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 TOX3O15405 576 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 GUSBP08236 651 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 SPINK2P20155 84 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 AADACP22760 399 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 LMO1P25800 156 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 UCP2P55851 309 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 UBE2G2P60604 165 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ACOT6Q3I5F7 207 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 C1orf194Q5T5A4 169 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 FAM90A2PQ658T7 463 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 KCNIP4Q6PIL6 250 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 H1FNTQ75WM6 255 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ARV1Q9H2C2 271 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ZDHHC11Q9H8X9 412 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 WNT16Q9UBV4 365 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ABCA7Q8IZY2 2146 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 CFPP27918 469 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ARL4DP49703 201 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 CLDN17P56750 224 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 SPANXN5Q5MJ07 72 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 THEM4Q5T1C6 240 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 PRR18Q8N4B5 295 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ST6GALNAC3Q8NDV1 305 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 CMTM2Q8TAZ6 248 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 Q9N2K0 584 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 CUTCQ9NTM9 273 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 IGHV3-20A0A0C4DH32 117 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 IGKV1-9A0A0C4DH69 117 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ECI1P42126 302 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 ZNF573Q86YE8 665 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 OR1L6Q8NGR2 347 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 OR2AE1Q8NHA4 323 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 SGCZQ96LD1 299 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 CCNL2Q96S94 520 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 TMEM9BQ9NQ34 198 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 NAT8Q9UHE5 227 aa8.49□□□□□ -1.05
TNFAIP3-210ENST00000620204 OBSL1O75147 1896 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 SPTBN5Q9NRC6 3674 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 ADH1BP00325 375 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 SERPINE2P07093 398 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 PSMB3P49720 205 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 HINT1P49773 126 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 MRPS11P82912 194 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 VAMP3Q15836 100 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 DNLZQ5SXM8 178 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 Q6ZN92 141 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 SLC25A26Q70HW3 274 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 DOK3Q7L591 496 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 TCF23Q7RTU1 214 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 OR4C5Q8NGB2 326 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 OR1K1Q8NGR3 316 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 RBM24Q9BX46 236 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 OR51B6Q9H340 312 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 PLEK2Q9NYT0 353 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 COPS7AQ9UBW8 275 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 C2orf16Q68DN1 1984 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 PITX3O75364 302 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 IL33O95760 270 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 ANOS1P23352 680 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 TMEM183BQ1AE95 376 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 PIGYQ3MUY2 71 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 DEGS2Q6QHC5 323 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 UBE2ZQ9H832 354 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 HOXA6P31267 233 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 BRS3P32247 399 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 TAS2R30P59541 319 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 HHEXQ03014 270 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 RNASEH2CQ8TDP1 164 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 SLC37A2Q8TED4 501 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 IL1F10Q8WWZ1 152 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 HLA-CQ95604 372 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 BORCS8Q96FH0 119 aa8.48□□□□□ -1.05
TNFAIP3-210ENST00000620204 IMMP2LQ96T52 175 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms