RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TMEM68Q96MH6 324 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 TEAD3Q99594 435 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 RNF5Q99942 180 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 SULT4A1Q9BR01 284 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 C11orf68Q9H3H3 251 aaKnown RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 ING3Q9NXR8 418 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 OR14J1Q9UGF5 321 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 WSB1Q9Y6I7 421 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 IGHV4OR15-8A0A075B7B6 117 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 A0A087WW49 117 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 MSGN1A6NI15 193 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 FAM183AA6NL82 134 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 LINC01548A6NM66 108 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 ORC5O43913 435 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 CNIH1O95406 144 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 PIPP12273 146 aaPredicted RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 VHLP40337 213 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 MAP2K4P45985 399 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 YAP1P46937 504 aaKnown RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 ACTR3P61158 418 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 SLC25A48Q6ZT89 311 aaKnown RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 TRAPPC6BQ86SZ2 158 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 ERI1Q8IV48 349 aaKnown RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 PYURFQ96I23 114 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 SPACA5Q96QH8 159 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 MAGIXQ9H6Y5 334 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 ERGIC3Q9Y282 383 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 HSPG2P98160 4391 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 IGKV1-27A0A075B6S5 117 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 OR2H2O95918 312 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 ARSBP15848 533 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 H2AFXP16104 143 aaPredicted RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 HOXB6P17509 224 aaKnown RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 AADACP22760 399 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 CD24P25063 80 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 RPS27P42677 84 aaKnown RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 ATP1B3P54709 279 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 SLURP1P55000 103 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 GMFBP60983 142 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 GABPB1Q06547 395 aaPredicted RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 STEAP3Q658P3 488 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 TRAT1Q6PIZ9 186 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 FKBP9P1Q75LS8 142 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 ZNF554Q86TJ5 538 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 DNAJC9Q8WXX5 260 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 BARHL1Q9BZE3 327 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 EGLN3Q9H6Z9 239 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 TECRQ9NZ01 308 aaKnown RBP3.47□□□□□ -1.85
SNCA-213ENST00000618500 MAGEL2Q9UJ55 1249 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 COPS3Q9UNS2 423 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 KLHDC2Q9Y2U9 406 aa3.47□□□□□ -1.85
SNCA-213ENST00000618500 IGHV7-81A0A0B4J1V7 117 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 TMEM269A0A1B0GVZ9 245 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 NME4O00746 187 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 GSTA4O15217 222 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 FABP3P05413 133 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 CSN3P07498 182 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 C21orf33P30042 268 aaPredicted RBP3.46□□□□□ -1.85
SNCA-213ENST00000618500 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.85
SNCA-213ENST00000618500 EDDM3AQ14507 147 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 KLK9Q2XQG4 91 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 AKIRIN2Q53H80 203 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 KRBOX4Q5JUW0 171 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 BCL2L15Q5TBC7 163 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 BAIAP2L2Q6UXY1 529 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 Q6ZWC4 215 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 OR9G4Q8NGQ1 327 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 OR51E1Q8TCB6 317 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 ARPC1AQ92747 370 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 FAM162AQ96A26 154 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 SLAMF9Q96A28 289 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 FAM110AQ9BQ89 295 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 GGTLC1Q9BX51 225 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 RANGRFQ9HD47 186 aaPredicted RBP3.46□□□□□ -1.85
SNCA-213ENST00000618500 GPR173Q9NS66 373 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 ADAM30Q9UKF2 790 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 KLK9Q9UKQ9 250 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 NUBP2Q9Y5Y2 271 aa3.46□□□□□ -1.85
SNCA-213ENST00000618500 CCDC182A6NF36 153 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 H3BSH0 61 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 EDF1O60869 148 aaKnown RBP3.46□□□□□ -1.86
SNCA-213ENST00000618500 RBBP9O75884 186 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 SPDEFO95238 335 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 ISG15P05161 165 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 GABRR1P24046 479 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 PRDX6P30041 224 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 HTR1FP30939 366 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 SRSF7Q16629 238 aaKnown RBP eCLIP3.46□□□□□ -1.86
SNCA-213ENST00000618500 RSBN1Q5VWQ0 802 aaPredicted RBP3.46□□□□□ -1.86
SNCA-213ENST00000618500 CATSPERDQ86XM0 798 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 GAPTQ8N292 157 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 RPP25LQ8N5L8 163 aaKnown RBP3.46□□□□□ -1.86
SNCA-213ENST00000618500 GVQW1Q8N7I0 195 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 FBLIM1Q8WUP2 373 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 FANCD2OSQ96PS1 177 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 TUBA4BQ9H853 241 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 GFOD1Q9NXC2 390 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms