RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SSX2Q16385 188 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 AANATQ16613 207 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 OLFML2AQ68BL7 652 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 LYPD6Q86Y78 171 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 MRGPRDQ8TDS7 321 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 WFDC12Q8WWY7 111 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 SLITRK2Q9H156 845 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 BANF2Q9H503 90 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 ABCB10Q9NRK6 738 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 CALYQ9NYX4 217 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 TRAV39A0A0B4J263 110 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 CLPSL1A2RUU4 121 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 POM121CA8CG34 1229 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 SC5DO75845 299 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 UCHL1P09936 223 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 MGMTP16455 207 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 NFYBP25208 207 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 PAX5Q02548 391 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 TPBGQ13641 420 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 MINOS1Q5TGZ0 78 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 Q6ZSV7 163 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 ZNF367Q7RTV3 350 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 LRRTM1Q86UE6 522 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 ABHD12Q8N2K0 398 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 TMEM104Q8NE00 496 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 OR4P4Q8NGL7 312 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 FAM46BQ96A09 425 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 MALSU1Q96EH3 234 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 MGLLQ99685 303 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 SELENOIQ9C0D9 397 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 Q9H521 79 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 ZNF286AQ9HBT8 521 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 ISYNA1Q9NPH2 558 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 HILPDAQ9Y5L2 63 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 MINOS1-NBL1R4GNA1 71 aa12.92□□□□□ -0.34
BRCA1-228ENST00000618469 NOTCH1P46531 2555 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 KBTBD11-OT1A0A1B0GTJ5 212 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 TMEM30CPA0ZSE6 113 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 IL1AP01583 271 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 CPEP16870 476 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 PSMA1P25786 263 aaKnown RBP12.91□□□□□ -0.34
BRCA1-228ENST00000618469 HTR1DP28221 377 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 SSTR5P35346 364 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 GABARAPL2P60520 117 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 TRAM1Q15629 374 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 LTC4SQ16873 150 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 GLT8D1Q68CQ7 371 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 BRICD5Q6PL45 260 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 RTN4RL2Q86UN3 420 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 LINC01006Q8NI28 216 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 ZNF596Q8TC21 504 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
BRCA1-228ENST00000618469 KIRREL1Q96J84 757 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 CST11Q9H112 138 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 SPACA1Q9HBV2 294 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 RCC2Q9P258 522 aaKnown RBP12.91□□□□□ -0.34
BRCA1-228ENST00000618469 RRP15Q9Y3B9 282 aaKnown RBP12.91□□□□□ -0.34
BRCA1-228ENST00000618469 WNK1Q9H4A3 2382 aa12.91□□□□□ -0.34
BRCA1-228ENST00000618469 F2RL2O00254 374 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 TOR1AO14656 332 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 CHST1O43916 411 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 JUNBP17275 347 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-228ENST00000618469 SRMP19623 302 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 CD34P28906 385 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 RAB13P51153 203 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.34
BRCA1-228ENST00000618469 UTF1Q5T230 341 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 SLC35E4Q6ICL7 350 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 RAB12Q6IQ22 244 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 TMEM91Q6ZNR0 172 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 Q96M66 194 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 KCNK15Q9H427 330 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 RAB18Q9NP72 206 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 IDI2-AS1Q9NZ38 188 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 TCF19Q9Y242 345 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 RNF114Q9Y508 228 aa12.9□□□□□ -0.34
BRCA1-228ENST00000618469 A0A087X0M5 115 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 A0A1B0GX30 115 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 AIPO00170 330 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 ARL6IP5O75915 188 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 MPIG6BO95866 241 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 IGLV1-47P01700 117 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 UBBP0CG47 229 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 CGB3P0DN86 165 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 CGB7P0DN87 165 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 GABRA5P31644 462 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 HLA-DRB5Q30154 266 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 C1QL4Q86Z23 238 aa12.89□□□□□ -0.35
BRCA1-228ENST00000618469 OR4C13Q8NGP0 309 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms