RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 OR8U8P0C7N1 319 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 CHRNB4P30926 498 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 OR3A1P47881 315 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 TMEM104Q8NE00 496 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 PRDM14Q9GZV8 571 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 KIAA1671Q9BY89 1806 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 C9orf170A2RU37 121 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 AQP7O14520 342 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 FCER1GP30273 86 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 UBE2G2P60604 165 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 UQCC3Q6UW78 93 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 KLHDC1Q8N7A1 406 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 A0A1W2PP11 408 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 SSSCA1O60232 199 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 GABRA6Q16445 453 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 C19orf48Q6RUI8 117 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 ABHD17AQ96GS6 310 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 MRPL13Q9BYD1 178 aaKnown RBP12.04□□□□□ -0.48
CIITA-213ENST00000618327 DHRS7CA6NNS2 312 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 DLL1O00548 723 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 ZNF626Q68DY1 528 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 AKR1E2Q96JD6 320 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 SLC35D1Q9NTN3 355 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 DEFB108AA8MXU0 73 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 NAT1P18440 290 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 KLK2P20151 261 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
CIITA-213ENST00000618327 UBE2G1P62253 170 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
CIITA-213ENST00000618327 PLAC9Q5JTB6 97 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 PEAR1Q5VY43 1037 aaPredicted RBP12.03□□□□□ -0.48
CIITA-213ENST00000618327 NCR3LG1Q68D85 454 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 C17orf78Q8N4C9 275 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 SLC25A38Q96DW6 304 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 TAAR6Q96RI8 345 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 RNASEK-C17orf49H0YIS7 233 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 EFNA2O43921 213 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 FABP1P07148 127 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 LHX2P50458 406 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
CIITA-213ENST00000618327 Q6ZT83 130 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 KLHDC3Q9BQ90 382 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 MAGT1Q9H0U3 335 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 NARFLQ9H6Q4 476 aa12.03□□□□□ -0.48
CIITA-213ENST00000618327 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 TRDCB7Z8K6 153 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 DUS4LO95620 317 aaKnown RBP12.02□□□□□ -0.48
CIITA-213ENST00000618327 FGF7P21781 194 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 DTYMKP23919 212 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 CLDN18P56856 261 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 ZNF816Q0VGE8 651 aaPredicted RBP12.02□□□□□ -0.48
CIITA-213ENST00000618327 KCNMB1Q16558 191 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 RNF7Q9UBF6 113 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 KIF26AQ9ULI4 1882 aaPredicted RBP12.02□□□□□ -0.48
CIITA-213ENST00000618327 SHISA3A0PJX4 238 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 PINLYPA6NC86 204 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 K7EQM0 130 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 PRF1P14222 555 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 SPICQ8N5J4 248 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 KDF1Q8NAX2 398 aaPredicted RBP12.02□□□□□ -0.48
CIITA-213ENST00000618327 ZNF488Q96MN9 340 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 SFXN3Q9BWM7 321 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 ACTR3CQ9C0K3 210 aaPredicted RBP12.02□□□□□ -0.48
CIITA-213ENST00000618327 RAB1BQ9H0U4 201 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 MS4A5Q9H3V2 200 aa12.02□□□□□ -0.48
CIITA-213ENST00000618327 ZNF318Q5VUA4 2279 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 TRAV38-1A0A0B4J264 116 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 M0R1X1 148 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 CRHP06850 196 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 G0S2P27469 103 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 EFNB1P98172 346 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 FOXO1Q12778 655 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 SURF2Q15527 256 aaPredicted RBP12.02□□□□□ -0.49
CIITA-213ENST00000618327 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 FAM103A1Q9BTL3 118 aaKnown RBP12.02□□□□□ -0.49
CIITA-213ENST00000618327 ZDHHC11Q9H8X9 412 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 RAB18Q9NP72 206 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 TREM2Q9NZC2 230 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 OR6C3Q9NZP0 311 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 PSG11Q9UQ72 335 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.49
CIITA-213ENST00000618327 SNRPEP62304 92 aaKnown RBP12.02□□□□□ -0.49
CIITA-213ENST00000618327 CD300CQ08708 224 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 Q0VFX4 171 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 OR10P1Q8NGE3 313 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 ZNF837Q96EG3 531 aaPredicted RBP12.02□□□□□ -0.49
CIITA-213ENST00000618327 NAA60Q9H7X0 242 aa12.02□□□□□ -0.49
CIITA-213ENST00000618327 hADV38S2A0JD32 116 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 ADAM20O43506 726 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 FAM3AP98173 230 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 C11orf87Q6NUJ2 197 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 RGP1Q92546 391 aaPredicted RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms