RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 ALPLP05186 524 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 RPSAP08865 295 aaKnown RBP19.66■□□□□ 0.74
PTPRF-216ENST00000617451 DCTN2Q13561 401 aaKnown RBP19.66■□□□□ 0.74
PTPRF-216ENST00000617451 GALEQ14376 348 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 IL13RA2Q14627 380 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 LTC4SQ16873 150 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 SLC35E3Q7Z769 313 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 LHFPL3Q86UP9 236 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 COMMD1Q8N668 190 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 KLHL30-AS1Q8NEE0 82 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 OR10A7Q8NGE5 316 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 MRGPRDQ8TDS7 321 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 MRPL48Q96GC5 212 aaKnown RBP19.66■□□□□ 0.74
PTPRF-216ENST00000617451 ISG20L2Q9H9L3 353 aaKnown RBP19.66■□□□□ 0.74
PTPRF-216ENST00000617451 KCNJ3P48549 501 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 GNG10P50151 68 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 RASSF2P50749 326 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 SLC35B1P78383 322 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 ZSCAN26Q16670 478 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 SYS1Q8N2H4 156 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 Q8NFD4 153 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 OR10X1Q8NGY0 326 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 PLPPR1Q8TBJ4 325 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 MYCBPQ99417 103 aaPredicted RBP19.65■□□□□ 0.74
PTPRF-216ENST00000617451 ALG8Q9BVK2 526 aa19.65■□□□□ 0.74
PTPRF-216ENST00000617451 TMEM212A6NML5 194 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 SNTNA6NMZ2 147 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 SSTR5P35346 364 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 EBI3Q14213 229 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 LPCAT4Q643R3 524 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 ZNF529Q6P280 563 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 UNQ9370/PRO34162Q6UXP9 181 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 ZNF695Q8IW36 515 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 FOXRED2Q8IWF2 684 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 STPG2Q8N412 459 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 AASSQ9UDR5 926 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 ZMAT5Q9UDW3 170 aaKnown RBP19.64■□□□□ 0.73
PTPRF-216ENST00000617451 DHDHQ9UQ10 334 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 ORC6Q9Y5N6 252 aa19.64■□□□□ 0.73
PTPRF-216ENST00000617451 E9PI62 339 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 H0YHG0 523 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 GABRPO00591 440 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 PIGYQ3MUY2 71 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 OR5AK2Q8NH90 309 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 TNFAIP8L1Q8WVP5 186 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 CPNE2Q96FN4 548 aaPredicted RBP19.63■□□□□ 0.73
PTPRF-216ENST00000617451 PDCD1LG2Q9BQ51 273 aa19.63■□□□□ 0.73
PTPRF-216ENST00000617451 TRAV39A0A0B4J263 110 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 A0A1W2PPE3 182 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 LINC01548A6NM66 108 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 RAB3AP20336 220 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 DGCR2P98153 550 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 ZNF816Q0VGE8 651 aaPredicted RBP19.62■□□□□ 0.73
PTPRF-216ENST00000617451 ZIK1Q3SY52 487 aaPredicted RBP19.62■□□□□ 0.73
PTPRF-216ENST00000617451 ASCL4Q6XD76 172 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 SATL1Q86VE3 508 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 OR10K1Q8NGX5 313 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 TSEN15Q8WW01 171 aaKnown RBP19.62■□□□□ 0.73
PTPRF-216ENST00000617451 GPER1Q99527 375 aa19.62■□□□□ 0.73
PTPRF-216ENST00000617451 EI24O14681 340 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 HSD17B6O14756 317 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 GABRB1P18505 474 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 MRPL28Q13084 256 aaKnown RBP19.61■□□□□ 0.73
PTPRF-216ENST00000617451 RSU1Q15404 277 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 TEX38Q6PEX7 206 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 OR51A2Q8NGJ7 313 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 RAX2Q96IS3 184 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 EAF1Q96JC9 268 aaPredicted RBP19.61■□□□□ 0.73
PTPRF-216ENST00000617451 DUX3Q96PT4 197 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 DPCDQ9BVM2 203 aaPredicted RBP19.61■□□□□ 0.73
PTPRF-216ENST00000617451 ERVK13-1Q9NX77 482 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 ZNF581Q9P0T4 197 aa19.61■□□□□ 0.73
PTPRF-216ENST00000617451 IGHV1-3A0A0C4DH29 117 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 CCL24O00175 119 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 AP4M1O00189 453 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 CCRL2O00421 344 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 MAGEB3O15480 346 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 ATP5HO75947 161 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 GAPDHP04406 335 aaKnown RBP19.6■□□□□ 0.73
PTPRF-216ENST00000617451 GZMHP20718 246 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 MOB3BQ86TA1 216 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 TGIF2LXQ8IUE1 241 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 Q8N6K4 173 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 SUMF2Q8NBJ7 301 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 TFAP2CQ92754 450 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 IFT22Q9H7X7 185 aa19.6■□□□□ 0.73
PTPRF-216ENST00000617451 FADS2O95864 444 aaKnown RBP19.59■□□□□ 0.73
PTPRF-216ENST00000617451 GPR12P47775 334 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 REG1BP48304 166 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 GP2P55259 537 aaKnown RBP19.59■□□□□ 0.73
PTPRF-216ENST00000617451 IZUMO1Q8IYV9 350 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 PYDC1Q8WXC3 89 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 FAM192AQ9GZU8 254 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 ABCG5Q9H222 651 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 DCLRE1BQ9H816 532 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 FAM118AQ9NWS6 357 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 ST3GAL6Q9Y274 331 aa19.59■□□□□ 0.73
PTPRF-216ENST00000617451 IGHV3-72A0A0B4J1Y9 119 aa19.58■□□□□ 0.72
PTPRF-216ENST00000617451 NCBP2LA6PVI3 153 aaKnown RBP19.58■□□□□ 0.72
PTPRF-216ENST00000617451 RAMP3O60896 148 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms