RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 LINC00312Q9Y6C7 94 aa12.16□□□□□ -0.46
CD48-203ENST00000613788 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 TRBV6-6A0A0A6YYG2 114 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 PPIAL4CA0A0B4J2A2 164 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 ENSAO43768 121 aaKnown RBP12.15□□□□□ -0.46
CD48-203ENST00000613788 NAPSAO96009 420 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 MSMBP08118 114 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 PPIAL4GP0DN37 164 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 GZMHP20718 246 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 PTBP1P26599 531 aaKnown RBP eCLIP12.15□□□□□ -0.46
CD48-203ENST00000613788 ETV6P41212 452 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 MADCAM1Q13477 382 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 TRAPPC6BQ86SZ2 158 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 FAM185AQ8N0U4 392 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 LY6G5BQ8NDX9 201 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 OR4K15Q8NH41 348 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 MRPL30Q8TCC3 161 aaKnown RBP12.15□□□□□ -0.46
CD48-203ENST00000613788 CORO2AQ92828 525 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 ABHD1Q96SE0 405 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 SOSTQ9BQB4 213 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 C19orf12Q9NSK7 152 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
CD48-203ENST00000613788 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
CD48-203ENST00000613788 UBE2J1Q9Y385 318 aaPredicted RBP12.15□□□□□ -0.46
CD48-203ENST00000613788 CCDC168Q8NDH2 2452 aa12.15□□□□□ -0.47
CD48-203ENST00000613788 A0A0G2JMP0 313 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 A0A0X1KG70 313 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 KIR2DS1A0A191URI9 304 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 C22orf46C9J442 243 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 SULT1C2O00338 296 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 SMAD7O15105 426 aaKnown RBP12.14□□□□□ -0.47
CD48-203ENST00000613788 DTYMKP23919 212 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 CBX5P45973 191 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 MRPS10P82664 201 aaKnown RBP12.14□□□□□ -0.47
CD48-203ENST00000613788 CR1LQ2VPA4 569 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 BTNL3Q6UXE8 466 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 MOB1BQ7L9L4 216 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 CIARTQ8N365 385 aaPredicted RBP12.14□□□□□ -0.47
CD48-203ENST00000613788 OR4M2Q8NGB6 313 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 NUDCD2Q8WVJ2 157 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 CYYR1Q96J86 154 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 HDHD3Q9BSH5 251 aaPredicted RBP12.14□□□□□ -0.47
CD48-203ENST00000613788 LPAR2Q9HBW0 351 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 TAS2R3Q9NYW6 316 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 KCNIP1Q9NZI2 227 aa12.14□□□□□ -0.47
CD48-203ENST00000613788 TRAV20A0A0B4J274 112 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 CTDSPLO15194 276 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 IGHV4-31P0DP07 118 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 PTHLHP12272 177 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 GLP1RP43220 463 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 ZNF45Q02386 682 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 SRSF7Q16629 238 aaKnown RBP eCLIP12.13□□□□□ -0.47
CD48-203ENST00000613788 C6orf183Q5T699 404 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 CYB5R2Q6BCY4 276 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 ZNF554Q86TJ5 538 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 FCAMRQ8WWV6 532 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 S100ZQ8WXG8 99 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 GAL3ST2Q9H3Q3 398 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 RAB9BQ9NP90 201 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 MBNL3Q9NUK0 354 aaKnown RBP12.13□□□□□ -0.47
CD48-203ENST00000613788 OPN4Q9UHM6 478 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 MALRD1Q5VYJ5 2156 aa12.13□□□□□ -0.47
CD48-203ENST00000613788 MAP1AP78559 2803 aaPredicted RBP12.12□□□□□ -0.47
CD48-203ENST00000613788 hCG_1809904A0A1W2PP81 198 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 A0A1W2PPE2 198 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 A0A1W2PR64 198 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 A0A1W2PRV1 198 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 ZNF729A6NN14 1252 aaPredicted RBP12.12□□□□□ -0.47
CD48-203ENST00000613788 ORC5O43913 435 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 SSX5O60225 188 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 LPLP06858 475 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 FCGR3AP08637 254 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
CD48-203ENST00000613788 GATA3P23771 443 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 PAX2Q02962 417 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 ZNF880Q6PDB4 577 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 OR13A1Q8NGR1 328 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 MRGPRDQ8TDS7 321 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
CD48-203ENST00000613788 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 ZNF714Q96N38 554 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 ST6GALNAC5Q9BVH7 336 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 Q9N2K0 584 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 MMP26Q9NRE1 261 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 V9GYH0 126 aa12.12□□□□□ -0.47
CD48-203ENST00000613788 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 TGFAP01135 160 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 ZNF728P0DKX0 622 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 ZNF273Q14593 569 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms