RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 GZMHP20718 246 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 VEGFCP49767 419 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 KLF17Q5JT82 389 aaPredicted RBP10.88□□□□□ -0.67
MDC1-209ENST00000613547 SIGIRRQ6IA17 410 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 METAP1DQ6UB28 335 aaPredicted RBP10.88□□□□□ -0.67
MDC1-209ENST00000613547 ZNF497Q6ZNH5 498 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 SLC16A12Q6ZSM3 486 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 USP43Q70EL4 1123 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
MDC1-209ENST00000613547 FAM89BQ8N5H3 189 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 PHF21AQ96BD5 680 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 RAB9BQ9NP90 201 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 TRAPPC2LQ9UL33 140 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 ETV7Q9Y603 341 aa10.88□□□□□ -0.67
MDC1-209ENST00000613547 WNK2Q9Y3S1 2297 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 NF1P21359 2839 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 A0A0B4J203 849 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 CENPVL3A0A0U1RRI6 287 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 SOCS1O15524 211 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 IGHV1-8P0DP01 117 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 TGFBR1P36897 503 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 RPS19P39019 145 aaKnown RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 DLX6P56179 175 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 RIPPLY3P57055 190 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 MRPS15P82914 257 aaKnown RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 ARL6IP1Q15041 203 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 CTF1Q16619 201 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 C6orf183Q5T699 404 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 OR52W1Q6IF63 320 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 TRAT1Q6PIZ9 186 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 RBMS3Q6XE24 437 aaKnown RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 ZNF782Q6ZMW2 699 aaPredicted RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 Q6ZTK2 550 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 TCF23Q7RTU1 214 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 C6orf201Q7Z4U5 140 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 OR13A1Q8NGR1 328 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 OR13D1Q8NGV5 346 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 LGALS14Q8TCE9 139 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 RAB2BQ8WUD1 216 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 SLC25A46Q96AG3 418 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 RAB3CQ96E17 227 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 BCL7BQ9BQE9 202 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 NAA50Q9GZZ1 169 aaKnown RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 ATG5Q9H1Y0 275 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 CHMP1AQ9HD42 196 aaPredicted RBP10.87□□□□□ -0.67
MDC1-209ENST00000613547 ABRACLQ9P1F3 81 aa10.87□□□□□ -0.67
MDC1-209ENST00000613547 A0A0A6YYD4 124 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 KBTBD11-OT1A0A1B0GTJ5 212 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 RNASEK-C17orf49H0YIS7 233 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 MT-ND4P03905 459 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 CDK2P24941 298 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 UBE2E1P51965 193 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 EFNB2P52799 333 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 TMBIM6P55061 237 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 HEPN1Q6WQI6 88 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 BRD3OSQ6XYD6 125 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 C9orf139Q6ZV77 190 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 PDZD9Q8IXQ8 264 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 C11orf42Q8N5U0 333 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 OR10R2Q8NGX6 335 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 MRGPRDQ8TDS7 321 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 ZNF418Q8TF45 676 aaPredicted RBP10.86□□□□□ -0.67
MDC1-209ENST00000613547 TNFRSF14Q92956 283 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 KCTD12Q96CX2 325 aaKnown RBP10.86□□□□□ -0.67
MDC1-209ENST00000613547 SULT4A1Q9BR01 284 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 FAAP24Q9BTP7 215 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 SUCNR1Q9BXA5 334 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
MDC1-209ENST00000613547 CALYQ9NYX4 217 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 ZNF69Q9UC07 566 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 SESN1Q9Y6P5 492 aa10.86□□□□□ -0.67
MDC1-209ENST00000613547 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.67
MDC1-209ENST00000613547 ARHGAP32A7KAX9 2087 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 SPINT2O43291 252 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 ORC5O43913 435 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 PAHP00439 452 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 COX7A1P24310 79 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 RORCP51449 518 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 KLRD1Q13241 179 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 PRAMEF5Q5TYX0 476 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 GAPTQ8N292 157 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 OR4K15Q8NH41 348 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 CCDC107Q8WV48 283 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 C22orf15Q8WYQ4 148 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 AP3S1Q92572 193 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 ARHGAP5-AS1Q96IT6 56 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 PECRQ9BY49 303 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 DCSTAMPQ9H295 470 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 C12orf4Q9NQ89 552 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 RHBDL2Q9NX52 303 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 FAM96BQ9Y3D0 163 aa10.85□□□□□ -0.67
MDC1-209ENST00000613547 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms