RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SLC25A6P12236 298 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 RCC1P18754 421 aaPredicted RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 CA6P23280 308 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 LPAR6P43657 344 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 NKX2-1P43699 371 aaPredicted RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 DVL1P1P54792 670 aaPredicted RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 PPP1CBP62140 327 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 HLA-DRB3P79483 266 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 TSC22D1Q15714 1073 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 MEX3BQ6ZN04 569 aaKnown RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 Q6ZT83 130 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 FAM214BQ7L5A3 538 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 FAM219AQ8IW50 185 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 BATF2Q8N1L9 274 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 OR10J5Q8NHC4 309 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 ERGIC1Q969X5 290 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 C11orf1Q9H5F2 150 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 LUZP4Q9P127 313 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 PURGQ9UJV8 347 aaKnown RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.99
PABPC1-224ENST00000610907 OR2W1Q9Y3N9 320 aa8.9□□□□□ -0.99
PABPC1-224ENST00000610907 IGKV1-6A0A0C4DH72 117 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 NKX2-6A6NCS4 301 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 TMEM210A6NLX4 147 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 TRIM77I1YAP6 450 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-224ENST00000610907 SMPD2O60906 423 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 H2AFB1P0C5Y9 115 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 UCP2P55851 309 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 ERVK11-1P61568 191 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 ID3Q02535 119 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 ZNF266Q14584 549 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 GUSBP1Q15486 140 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 HMGN3Q15651 99 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 NMSQ5H8A3 153 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 ATP1A1-AS1Q5TC04 95 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 ZNF324BQ6AW86 544 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-224ENST00000610907 Q6P435 159 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 FAM122CQ6P4D5 195 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 IGF2-ASQ6U949 168 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 H1FOOQ8IZA3 346 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-224ENST00000610907 PUSL1Q8N0Z8 303 aaKnown RBP8.89□□□□□ -0.99
PABPC1-224ENST00000610907 OR2C3Q8N628 320 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 C1orf162Q8NEQ5 155 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-224ENST00000610907 AKR1E2Q96JD6 320 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 NRIP2Q9BQI9 281 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 PLEKHF2Q9H8W4 249 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 IL36RNQ9UBH0 155 aa8.89□□□□□ -0.99
PABPC1-224ENST00000610907 TRAV17A0A0B4J275 112 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 IGKV1D-13A0A0B4J2D9 117 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 IQCF6A8MYZ5 107 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 AQP7O14520 342 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 TOR1AO14656 332 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 HS3ST1O14792 307 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 LILRA1O75019 489 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 PGLYRP1O75594 196 aaPredicted RBP8.88□□□□□ -0.99
PABPC1-224ENST00000610907 IGKV1-13P0DP09 117 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 GLI4P10075 376 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 ZNF44P15621 663 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 CBR1P16152 277 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 ADCYAP1P18509 176 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 IGHV1-2P23083 117 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 F2RP25116 425 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 NUBP1P53384 320 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 BAXQ07812 192 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 ZNF146Q15072 292 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 DHRS7BQ6IAN0 325 aaPredicted RBP8.88□□□□□ -0.99
PABPC1-224ENST00000610907 FIP1L1Q6UN15 594 aaKnown RBP8.88□□□□□ -0.99
PABPC1-224ENST00000610907 Q6ZRG5 221 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 C1orf174Q8IYL3 243 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 SUMF1Q8NBK3 374 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 RDH5Q92781 318 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 SMIM3Q9BZL3 60 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 TLNRD1Q9H1K6 362 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 CCL28Q9NRJ3 127 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 LYRM2Q9NU23 88 aaPredicted RBP8.88□□□□□ -0.99
PABPC1-224ENST00000610907 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 ZDHHC8Q9ULC8 765 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 NCOR1O75376 2440 aa8.88□□□□□ -0.99
PABPC1-224ENST00000610907 VPS13AQ96RL7 3174 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 CFAP54Q96N23 3096 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.87□□□□□ -0.99
PABPC1-224ENST00000610907 SH2D1BO14796 132 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 TSPAN15O95858 294 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 FTH1P19P0C7X4 201 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 PGA5P0DJD9 388 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 MUC1P15941 1255 aaPredicted RBP8.87□□□□□ -0.99
PABPC1-224ENST00000610907 AKR1C2P52895 323 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 VAMP2P63027 116 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 SRSF3P84103 164 aaKnown RBP8.87□□□□□ -0.99
PABPC1-224ENST00000610907 EWSR1Q01844 656 aaKnown RBP eCLIP8.87□□□□□ -0.99
PABPC1-224ENST00000610907 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 SMUG1Q53HV7 270 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 ZNF497Q6ZNH5 498 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 C20orf204Q6ZNR8 217 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 TMPRSS7Q7RTY8 843 aa8.87□□□□□ -0.99
PABPC1-224ENST00000610907 KDF1Q8NAX2 398 aaPredicted RBP8.87□□□□□ -0.99
PABPC1-224ENST00000610907 SCCPDHQ8NBX0 429 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms