RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GZMHP20718 246 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 BLVRBP30043 206 aaPredicted RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 SIGIRRQ6IA17 410 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 OR52W1Q6IF63 320 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 RBMS3Q6XE24 437 aaKnown RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 TCF23Q7RTU1 214 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 FAM89BQ8N5H3 189 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 C11orf42Q8N5U0 333 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 PLPPR1Q8TBJ4 325 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 TNFRSF14Q92956 283 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 NICN1Q9BSH3 213 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 SUCNR1Q9BXA5 334 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 PLEKHJ1Q9NW61 149 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 A0A0A6YYJ9 748 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 KBTBD11-OT1A0A1B0GTJ5 212 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 RNASEK-C17orf49H0YIS7 233 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 CLPXO76031 633 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 MT-ND4P03905 459 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 CLEC2LP0C7M8 214 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 CHATP28329 748 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 GLP1RP43220 463 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 VEGFCP49767 419 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 SCAND1P57086 179 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 IDNKQ5T6J7 187 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 HEPN1Q6WQI6 88 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 BRD3OSQ6XYD6 125 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 PDZD9Q8IXQ8 264 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 RAB9BQ9NP90 201 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 HSF4Q9ULV5 492 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
CTSA-219ENST00000607841 DOCK11Q5JSL3 2073 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 UBE2QL1A1L167 161 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 SOCS1O15524 211 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 TCF21O43680 179 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 GABARAPO95166 117 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 CDK2P24941 298 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 RPS19P39019 145 aaKnown RBP11.66□□□□□ -0.54
CTSA-219ENST00000607841 SERPINB10P48595 397 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 TRAT1Q6PIZ9 186 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 ZNF782Q6ZMW2 699 aaPredicted RBP11.66□□□□□ -0.54
CTSA-219ENST00000607841 Q6ZTK2 550 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 USP43Q70EL4 1123 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 C6orf201Q7Z4U5 140 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 OR13A1Q8NGR1 328 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 MRGPRDQ8TDS7 321 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 SLC6A7Q99884 636 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 FAAP24Q9BTP7 215 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 RIMS4Q9H426 269 aaPredicted RBP11.66□□□□□ -0.54
CTSA-219ENST00000607841 FAM96BQ9Y3D0 163 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 ETV7Q9Y603 341 aa11.66□□□□□ -0.54
CTSA-219ENST00000607841 A0A0A6YYD4 124 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 A0A0B4J203 849 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 NPFFO15130 113 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 ORC5O43913 435 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 SCGNO76038 276 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 CGB3P0DN86 165 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 CGB7P0DN87 165 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 COX7A1P24310 79 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 TGFBR1P36897 503 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 DLX1P56177 255 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 LGALS4P56470 323 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 VBP1P61758 197 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 NCS1P62166 190 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 KLRD1Q13241 179 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 ARL6IP1Q15041 203 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 C17orf58Q2M2W7 97 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 MIDNQ504T8 468 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 C6orf183Q5T699 404 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 RUSC1-AS1Q66K80 236 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.54
CTSA-219ENST00000607841 GAPTQ8N292 157 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 SULT4A1Q9BR01 284 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 ATG5Q9H1Y0 275 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 TMEM133Q9H2Q1 129 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 KCNIP1Q9NZI2 227 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 ABRACLQ9P1F3 81 aa11.65□□□□□ -0.54
CTSA-219ENST00000607841 WNK2Q9Y3S1 2297 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 MEIOCA2RUB1 952 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 FOXI3A8MTJ6 420 aaPredicted RBP11.64□□□□□ -0.55
CTSA-219ENST00000607841 NPIPB11E5RHQ5 1161 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 SNRPBP14678 240 aaKnown RBP11.64□□□□□ -0.55
CTSA-219ENST00000607841 EFNB2P52799 333 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 TMEM50BP56557 158 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 PRB3Q04118 309 aaPredicted RBP11.64□□□□□ -0.55
CTSA-219ENST00000607841 PRAMEF5Q5TYX0 476 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 HCP5Q6MZN7 132 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 SLC16A12Q6ZSM3 486 aa11.64□□□□□ -0.55
CTSA-219ENST00000607841 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms