RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CBX3Q13185 183 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 IGFBP7Q16270 282 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CR1LQ2VPA4 569 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C4orf46Q504U0 113 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 STUMQ69YW2 141 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 LYG2Q86SG7 212 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SLC38A6Q8IZM9 456 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FAM185AQ8N0U4 392 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MUC15Q8N387 334 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ANGPTL6Q8NI99 470 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MARCH1Q8TCQ1 289 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MAFIPQ8WZ33 124 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DYRK2Q92630 601 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PIK3IP1Q96FE7 263 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 LURAP1Q96LR2 239 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF2Q9BSG1 426 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TOLLIPQ9H0E2 274 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RAB9BQ9NP90 201 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C14orf166Q9Y224 244 aaKnown RBP10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 KIAA2026Q5HYC2 2103 aa10.31□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SPTBN1Q01082 2364 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 NBEAQ8NFP9 2946 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 IGKV1D-17A0A075B6S4 117 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MEIKINA0A087WXM9 373 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TRBV6-7A0A0A0MS04 114 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TRAV38-1A0A0B4J264 116 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PIGBOS1A0A0B4J2F0 54 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR5H14A6NHG9 310 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 K7N7A8 449 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SSNA1O43805 119 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SNAPC5O75971 98 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DUS4LO95620 317 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HPXP02790 462 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 WNT2P09544 360 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 GSTT2P0CG29 244 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MRPS11P82912 194 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 COL10A1Q03692 680 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DHRS2Q13268 280 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MSMO1Q15800 293 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TMEM30BQ3MIR4 351 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C17orf107Q6ZR85 190 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PLPPR1Q8TBJ4 325 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DACT3Q96B18 629 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C5orf66Q9H5L9 145 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 KCNIP1Q9NZI2 227 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF69Q9UC07 566 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR14J1Q9UGF5 321 aa10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 KLF2Q9Y5W3 355 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FAM221AA4D161 298 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 NKX6-3A6NJ46 265 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 LGALS8O00214 317 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SDCBPO00560 298 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 NDUFA2O43678 99 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 B3GALNT1O75752 331 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR2A4O95047 310 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PPYP01298 95 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HLA-AP01891 365 aaKnown RBP10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 GIPP09681 153 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FCGR2CP31995 323 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HERV-K104P61576 105 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RND3P61587 244 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FCN2Q15485 313 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CARTPTQ16568 116 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF788Q6ZQV5 615 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TMED4Q7Z7H5 227 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 DTX2Q86UW9 622 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 MUC20Q8N307 709 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CD177Q8N6Q3 437 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR2AK2Q8NG84 335 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR11H7Q8NGC8 314 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CYYR1Q96J86 154 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 OR2A7Q96R45 310 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 PHB2Q99623 299 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RTBDNQ9BSG5 229 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 FXYD6Q9H0Q3 95 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CLEC4MQ9H2X3 399 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF665Q9H7R5 613 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CBLN4Q9NTU7 201 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TRAPPC2LQ9UL33 140 aa10.29□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 TMEM178BH3BS89 294 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HSPB6O14558 160 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 RGS11O94810 467 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SFT2D2O95562 160 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C1QBP02746 253 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 GZMHP20718 246 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 NPY4RP50391 375 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 IL13RA1P78552 427 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 CCL8P80075 99 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 SRSF4Q08170 494 aaKnown RBP10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 ATXN7L3Q14CW9 347 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 HERPUD1Q15011 391 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
NEDD8-MDP1-203ENST00000604306 H1FOOQ8IZA3 346 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms