RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ATP6V1G2-DDX39BF2Z307 99 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 H0YIZ8 118 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 IFNA21P01568 189 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
VRK3-223ENST00000601341 KITLGP21583 273 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 GLRA1P23415 457 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 GRNP28799 593 aaKnown RBP9.94□□□□□ -0.82
VRK3-223ENST00000601341 FABP6P51161 128 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 BSPH1Q075Z2 132 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 TFF3Q07654 80 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 ATXN7L3Q14CW9 347 aaPredicted RBP9.94□□□□□ -0.82
VRK3-223ENST00000601341 SLC9A3R2Q15599 337 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 CEACAM21Q3KPI0 293 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 IL34Q6ZMJ4 242 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 Q6ZS49 121 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 C6orf201Q7Z4U5 140 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 SAXO1Q8IYX7 474 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 SUCNR1Q9BXA5 334 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 ZNF701Q9NV72 531 aaPredicted RBP9.94□□□□□ -0.82
VRK3-223ENST00000601341 PURGQ9UJV8 347 aaKnown RBP9.94□□□□□ -0.82
VRK3-223ENST00000601341 DIDO1Q9BTC0 2240 aaKnown RBP9.94□□□□□ -0.82
VRK3-223ENST00000601341 HIVEP3Q5T1R4 2406 aa9.94□□□□□ -0.82
VRK3-223ENST00000601341 SDCBPO00560 298 aaPredicted RBP9.93□□□□□ -0.82
VRK3-223ENST00000601341 ABCD4O14678 606 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 HTR3BO95264 441 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OR5H8P0DN80 308 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 CA6P23280 308 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 PDZK1IP1Q13113 114 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 SLC22A25Q6T423 547 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OSR2Q8N2R0 312 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 NUP37Q8NFH4 326 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OR5A2Q8NGI9 324 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 LINC01560Q8TB33 94 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 ARL11Q969Q4 196 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 RRNAD1Q96FB5 475 aaKnown RBP9.93□□□□□ -0.82
VRK3-223ENST00000601341 CMSS1Q9BQ75 279 aaKnown RBP9.93□□□□□ -0.82
VRK3-223ENST00000601341 ZNF2Q9BSG1 426 aaPredicted RBP9.93□□□□□ -0.82
VRK3-223ENST00000601341 PCDHB10Q9UN67 800 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 TIMM8AO60220 97 aaPredicted RBP9.93□□□□□ -0.82
VRK3-223ENST00000601341 LILRA1O75019 489 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 ADAP1O75689 374 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 C1QL1O75973 258 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 FCGR3AP08637 254 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 GABRR1P24046 479 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 SELENOVP59797 346 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 ZNF273Q14593 569 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 ALKBH6Q3KRA9 238 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 FAM74A1Q5RGS3 127 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OR8G5Q8NG78 346 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OR5T2Q8NGG2 359 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 TMEM171Q8WVE6 324 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OR5P3Q8WZ94 311 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 SLC5A7Q9GZV3 580 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 PLEKHA2Q9HB19 425 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 MMP26Q9NRE1 261 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 CRIM1Q9NZV1 1036 aa9.93□□□□□ -0.82
VRK3-223ENST00000601341 IGKV1-27A0A075B6S5 117 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 PQLC2LA1A4F0 135 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 OR5B21A6NL26 309 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 LGALS8O00214 317 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 PDCD6O75340 191 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 IGHV3-13P01766 116 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 GPM6AP51674 278 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
VRK3-223ENST00000601341 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 RAB32Q13637 225 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 RBM39Q14498 530 aaKnown RBP9.92□□□□□ -0.82
VRK3-223ENST00000601341 SMCO1Q147U7 214 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 BEX5Q5H9J7 111 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 NKAPLQ5M9Q1 402 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 C10orf91Q5T1B1 145 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 NCMAPQ5T1S8 102 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 VHLLQ6RSH7 139 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 TMEM200AQ86VY9 491 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 HPSE2Q8WWQ2 592 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 MICU1Q9BPX6 476 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 SYT3Q9BQG1 590 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 ZNF286AQ9HBT8 521 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 C12orf4Q9NQ89 552 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 LPAR3Q9UBY5 353 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 DUSP13Q9UII6 198 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 AK3Q9UIJ7 227 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 FZR1Q9UM11 496 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 ADGRG4Q8IZF6 3080 aa9.92□□□□□ -0.82
VRK3-223ENST00000601341 VSTM5A8MXK1 200 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 ZNF732B4DXR9 585 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 DEDDO75618 318 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 JTBO76095 146 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 FAM157CP0CG43 387 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 PI3P19957 117 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 FUT3P21217 361 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 RBM11P57052 281 aaKnown RBP9.91□□□□□ -0.82
VRK3-223ENST00000601341 GNG3P63215 75 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 TAF9Q16594 264 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 FAM185AQ8N0U4 392 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 BPIFCQ8NFQ6 507 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 OR10AD1Q8NGE0 317 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 PLPPR2Q96GM1 343 aa9.91□□□□□ -0.82
VRK3-223ENST00000601341 SMIM8Q96KF7 97 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms