RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 C10orf67Q8IYJ2 551 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 OR10A7Q8NGE5 316 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 OR51A2Q8NGJ7 313 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 OR52I1Q8NGK6 324 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 OR56B4Q8NH76 319 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 JAM3Q9BX67 310 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 A0A1W2PPI3 338 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 PSMB11A5LHX3 300 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 MPIG6BO95866 241 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 IGHV3-7P01780 117 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 SOX2P48431 317 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 RAB7AP51149 207 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 GTF2A1P52655 376 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-204ENST00000601038 PIGYQ3MUY2 71 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 CCDC58Q4VC31 144 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 DRAM1Q8N682 238 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 OR10K1Q8NGX5 313 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 RFESDQ8TAC1 157 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 PLPPR1Q8TBJ4 325 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 MRGPRDQ8TDS7 321 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 LEAP2Q969E1 77 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 SLC29A1Q99808 456 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 FAM118AQ9NWS6 357 aa13.48□□□□□ -0.25
SCAF1-204ENST00000601038 HTR3BO95264 441 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 CD2P06729 351 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 LIMS3P0CW19 117 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 LIMS4P0CW20 117 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 DIAPH2-AS1Q14236 149 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 RPL22L1Q6P5R6 122 aaKnown RBP13.47□□□□□ -0.25
SCAF1-204ENST00000601038 OR8H3Q8N146 312 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 GPR148Q8TDV2 347 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 RGP1Q92546 391 aaPredicted RBP13.47□□□□□ -0.25
SCAF1-204ENST00000601038 DPCDQ9BVM2 203 aaPredicted RBP13.47□□□□□ -0.25
SCAF1-204ENST00000601038 FAM192AQ9GZU8 254 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 IFT22Q9H7X7 185 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 TAS2R4Q9NYW5 299 aa13.47□□□□□ -0.25
SCAF1-204ENST00000601038 FGF16O43320 207 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 TMEM11P17152 192 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 GZMHP20718 246 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 SSTR5P35346 364 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 HES1Q14469 280 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 LTC4SQ16873 150 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 NHLRC3Q5JS37 347 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 ZNF329Q86UD4 541 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 C5orf56Q8N8D9 126 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 SUMF2Q8NBJ7 301 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 CHPT1Q8WUD6 406 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 APH1BQ8WW43 257 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 TMEM106AQ96A25 262 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 METTL9Q9H1A3 318 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 FGF20Q9NP95 211 aaPredicted RBP13.46□□□□□ -0.25
SCAF1-204ENST00000601038 TMEM138Q9NPI0 162 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 IL36GQ9NZH8 169 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 ST3GAL6Q9Y274 331 aa13.46□□□□□ -0.25
SCAF1-204ENST00000601038 TRAV39A0A0B4J263 110 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 K7EIL1 84 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 CDRT1O95170 752 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 GNG10P50151 68 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 HNF4GQ14541 408 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 XAF1Q6GPH4 301 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 OR51D1Q8NGF3 324 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 OR10X1Q8NGY0 326 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 ING4Q9UNL4 249 aa13.45□□□□□ -0.26
SCAF1-204ENST00000601038 OR7C1O76099 320 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 IGKV1D-33P01593 117 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 IGKV1-33P01594 117 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 CSTBP04080 98 aaKnown RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 DCKP27707 260 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 ZNF93P35789 620 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 RBM11P57052 281 aaKnown RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 KRTAP10-11P60412 298 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 RPL23AP62750 156 aaKnown RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 PPP3R1P63098 170 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 EGFEM1PQ0D2K5 195 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 ZNF816Q0VGE8 651 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 EBI3Q14213 229 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 TMPRSS11AQ6ZMR5 421 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 LINC00596Q86U02 117 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 MRPL41Q8IXM3 137 aaKnown RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 OR52N1Q8NH53 320 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 NOL4LQ96MY1 436 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 GPR61Q9BZJ8 451 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 S100A14Q9HCY8 104 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 ZFP57Q9NU63 452 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 PAK1IP1Q9NWT1 392 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-204ENST00000601038 ZNF581Q9P0T4 197 aa13.44□□□□□ -0.26
SCAF1-204ENST00000601038 A0A1W2PPE3 182 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 TMEM30CPA0ZSE6 113 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 SERPINE3A8MV23 424 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 OGG1O15527 345 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 WBP4O75554 376 aaKnown RBP13.43□□□□□ -0.26
SCAF1-204ENST00000601038 IGHG2P01859 326 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 GAPDHP04406 335 aaKnown RBP13.43□□□□□ -0.26
SCAF1-204ENST00000601038 SLC6A1P30531 599 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 THBS3P49746 956 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 ETV1P50549 477 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 SMN1Q16637 294 aaKnown RBP13.43□□□□□ -0.26
SCAF1-204ENST00000601038 DDI2Q5TDH0 399 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms