RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 UNC119Q13432 240 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 OR10K2Q6IF99 312 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 C12orf54Q6X4T0 127 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 GAPTQ8N292 157 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 FOXRED1Q96CU9 486 aaPredicted RBP12.74□□□□□ -0.37
RPS28-203ENST00000600659 KIRREL1Q96J84 757 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 DPAGT1Q9H3H5 408 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 ZNF286AQ9HBT8 521 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 GHRLQ9UBU3 117 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 MEIKINA0A087WXM9 373 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM172BPA6NC97 362 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A10PA6NDY2 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A18PA6NE21 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A16PA6NEW6 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A20PA6NIJ5 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A7PA6NKC0 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A22PA8MWA6 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A12PA8MX19 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A5PA8MXJ8 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A23PA8MXZ1 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 CRTAPO75718 401 aaPredicted RBP12.73□□□□□ -0.37
RPS28-203ENST00000600659 NDUFA7O95182 113 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 PAHP00439 452 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A15PP0C7V4 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A13PP0C7W8 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A14PP0C7W9 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 FAM90A24PP0C7X0 464 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 JUNBP17275 347 aaPredicted RBP12.73□□□□□ -0.37
RPS28-203ENST00000600659 MDKP21741 143 aaPredicted RBP12.73□□□□□ -0.37
RPS28-203ENST00000600659 GLP1RP43220 463 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 RPL15P61313 204 aaKnown RBP12.73□□□□□ -0.37
RPS28-203ENST00000600659 FOXL1Q12952 345 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 AANATQ16613 207 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 SLC35E4Q6ICL7 350 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 SSX3Q99909 188 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 CLEC7AQ9BXN2 247 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 SELENOIQ9C0D9 397 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 CALYQ9NYX4 217 aa12.73□□□□□ -0.37
RPS28-203ENST00000600659 VGLL3A8MV65 326 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 TMEM14DPA8MWL7 114 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 C15orf65H3BRN8 121 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 H3BUX3 64 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
RPS28-203ENST00000600659 IL1AP01583 271 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 CALRP27797 417 aaKnown RBP12.72□□□□□ -0.37
RPS28-203ENST00000600659 SSTR5P35346 364 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 ATAD3CQ5T2N8 411 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 ZNF497Q6ZNH5 498 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 SVOPQ8N4V2 548 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 OR6M1Q8NGM8 313 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 OR5R1Q8NH85 324 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 FAM46BQ96A09 425 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 BARHL1Q9BZE3 327 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 AK6Q9Y3D8 172 aaKnown RBP12.72□□□□□ -0.37
RPS28-203ENST00000600659 LRRC42Q9Y546 428 aa12.72□□□□□ -0.37
RPS28-203ENST00000600659 A0A0A6YYD4 124 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 SLC17A2O00624 439 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 ARL6IP5O75915 188 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 UBBP0CG47 229 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 HTR2CP28335 458 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 MINOS1Q5TGZ0 78 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 ZNF773Q6PK81 442 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 Q6ZSV7 163 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 ABHD12Q8N2K0 398 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 MALSU1Q96EH3 234 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 NICN1Q9BSH3 213 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 TM2D1Q9BX74 207 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 MMP24Q9Y5R2 645 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 MINOS1-NBL1R4GNA1 71 aa12.71□□□□□ -0.37
RPS28-203ENST00000600659 TRDV1A0A1B0GX56 115 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 TMEM30CPA0ZSE6 113 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 CHST1O43916 411 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 MPIG6BO95866 241 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 MT-ND4P03905 459 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 CHATP28329 748 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 RAG2P55895 527 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 LGALS4P56470 323 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
RPS28-203ENST00000600659 DYNC1I2Q13409 638 aaKnown RBP12.7□□□□□ -0.38
RPS28-203ENST00000600659 SSX2Q16385 188 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 HLA-DRB5Q30154 266 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 KCTD21Q4G0X4 260 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 FAM53AQ6NSI3 398 aaPredicted RBP12.7□□□□□ -0.38
RPS28-203ENST00000600659 CCBE1Q6UXH8 406 aaPredicted RBP12.7□□□□□ -0.38
RPS28-203ENST00000600659 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 CST11Q9H112 138 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 SPACA1Q9HBV2 294 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 IDI2-AS1Q9NZ38 188 aa12.7□□□□□ -0.38
RPS28-203ENST00000600659 FOXI3A8MTJ6 420 aaPredicted RBP12.69□□□□□ -0.38
RPS28-203ENST00000600659 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms