RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ZNF596Q8TC21 504 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MUL1Q969V5 352 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MALSU1Q96EH3 234 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 KIRREL1Q96J84 757 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 CNBD2Q96M20 576 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 SLITRK2Q9H156 845 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 C16orf95Q9H693 158 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 NDUFB11Q9NX14 153 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 OR6C3Q9NZP0 311 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 FBLN5Q9UBX5 448 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 KIF25Q9UIL4 384 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 BLOC1S6Q9UL45 172 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MRPS28Q9Y2Q9 187 aaKnown RBP7.1□□□□□ -1.27
SSBP4-208ENST00000600628 MINOS1-NBL1R4GNA1 71 aa7.1□□□□□ -1.27
SSBP4-208ENST00000600628 TRGV10A0A0A0MS01 117 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 MEX3AA1L020 520 aaKnown RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 FOXI3A8MTJ6 420 aaPredicted RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 TMEM14DPA8MWL7 114 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 LDLRAD4O15165 306 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 PAHP00439 452 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 IL1AP01583 271 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 MAS1P04201 325 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 MDKP21741 143 aaPredicted RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 GALP22466 123 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 CDK2P24941 298 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 GABRA5P31644 462 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 RAG2P55895 527 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 FABP5Q01469 135 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 UNC119Q13432 240 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 ATXN7L3Q14CW9 347 aaPredicted RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 LRRC75BQ2VPJ9 315 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 SLC22A6Q4U2R8 563 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 PAN3Q58A45 887 aaKnown RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 GLIPR1L1Q6UWM5 242 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 SLC16A12Q6ZSM3 486 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 Q6ZSV7 163 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 ZNF367Q7RTV3 350 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 CEACAM19Q7Z692 300 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 RTN4RL2Q86UN3 420 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 SPARTQ8N0X7 666 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 OR10A7Q8NGE5 316 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 OR4F5Q8NH21 305 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 LINC01006Q8NI28 216 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 WFDC12Q8WWY7 111 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 UFD1Q92890 307 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 FOXRED1Q96CU9 486 aaPredicted RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 CYYR1Q96J86 154 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 SSX3Q99909 188 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 TMED9Q9BVK6 235 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 DPCDQ9BVM2 203 aaPredicted RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 TM2D1Q9BX74 207 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 CLEC7AQ9BXN2 247 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 GAL3ST2Q9H3Q3 398 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 PCDHB16Q9NRJ7 776 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 MBNL3Q9NUK0 354 aaKnown RBP7.09□□□□□ -1.27
SSBP4-208ENST00000600628 ING4Q9UNL4 249 aa7.09□□□□□ -1.27
SSBP4-208ENST00000600628 NOTCH1P46531 2555 aa7.09□□□□□ -1.28
SSBP4-208ENST00000600628 TRAV1-2A0A0B4J238 106 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 CLPSL1A2RUU4 121 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 A6NDX4 124 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 F2RL2O00254 374 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 SLC17A2O00624 439 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 OR7C1O76099 320 aaPredicted RBP7.08□□□□□ -1.28
SSBP4-208ENST00000600628 MT-ND4P03905 459 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 CSTBP04080 98 aaKnown RBP7.08□□□□□ -1.28
SSBP4-208ENST00000600628 UBBP0CG47 229 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 VSIG8P0DPA2 414 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 MGMTP16455 207 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 GZMHP20718 246 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 SERPINA2P20848 420 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 PAX6P26367 422 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 CHATP28329 748 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 LOXL3P58215 753 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 PROK1P58294 105 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 HSD17B12Q53GQ0 312 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 PRAMEF5Q5TYX0 476 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 OR52W1Q6IF63 320 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 CCBE1Q6UXH8 406 aaPredicted RBP7.08□□□□□ -1.28
SSBP4-208ENST00000600628 GDPGP1Q6ZNW5 385 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF554Q86TJ5 538 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 Q8N2B8 174 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 ABHD12Q8N2K0 398 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 C8orf31Q8N9H6 132 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF565Q8N9K5 539 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 OR52M1Q8NGK5 317 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 WIPF2Q8TF74 440 aaPredicted RBP7.08□□□□□ -1.28
SSBP4-208ENST00000600628 NR1H4Q96RI1 486 aaPredicted RBP7.08□□□□□ -1.28
SSBP4-208ENST00000600628 BARHL1Q9BZE3 327 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 FAM192AQ9GZU8 254 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 BEX1Q9HBH7 125 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF286AQ9HBT8 521 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 SPACA1Q9HBV2 294 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 LRRC42Q9Y546 428 aa7.08□□□□□ -1.28
SSBP4-208ENST00000600628 A0A0A6YYD4 124 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 TRDV1A0A1B0GX56 115 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 BTBD17A6NE02 478 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 TRIM64CA6NLI5 447 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 FAM90A9PA6NNJ1 464 aa7.07□□□□□ -1.28
SSBP4-208ENST00000600628 H3BUX3 64 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms