RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 GAPTQ8N292 157 aa16.89■□□□□ 0.29
PNKP-214ENST00000600573 Q8TCH9 128 aa16.89■□□□□ 0.29
PNKP-214ENST00000600573 RDH5Q92781 318 aa16.89■□□□□ 0.29
PNKP-214ENST00000600573 WDR89Q96FK6 387 aaPredicted RBP16.89■□□□□ 0.29
PNKP-214ENST00000600573 PDCD10Q9BUL8 212 aa16.89■□□□□ 0.29
PNKP-214ENST00000600573 SLC23A1Q9UHI7 598 aa16.89■□□□□ 0.29
PNKP-214ENST00000600573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.88■□□□□ 0.29
PNKP-214ENST00000600573 DBX1A6NMT0 343 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 C17orf100A8MU93 164 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 TRDCB7Z8K6 153 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 CD8AP01732 235 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 HERV-K104P61576 105 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 FGL1Q08830 312 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 TESK1Q15569 626 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 EFNB3Q15768 340 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 LGALSLQ3ZCW2 172 aaPredicted RBP16.88■□□□□ 0.29
PNKP-214ENST00000600573 ADAM5Q6NVV9 412 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 CLEC18BQ6UXF7 455 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 KCTD9Q7L273 389 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 OR11L1Q8NGX0 322 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 LINC01560Q8TB33 94 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 ITLN1Q8WWA0 313 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 EGLN1Q9GZT9 426 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 TMEM165Q9HC07 324 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 RNF115Q9Y4L5 304 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 HMSDA8MTL9 139 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 CCSO14618 274 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 CLDN14O95500 239 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 LHBP01229 141 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 FCGR2CP31995 323 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 SUPT4H1P63272 117 aaKnown RBP16.88■□□□□ 0.29
PNKP-214ENST00000600573 SLC9A3R2Q15599 337 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 PPP1R35Q8TAP8 253 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 MRPL30Q8TCC3 161 aaKnown RBP16.88■□□□□ 0.29
PNKP-214ENST00000600573 MOB3AQ96BX8 217 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 MS4A5Q9H3V2 200 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 RNF7Q9UBF6 113 aa16.88■□□□□ 0.29
PNKP-214ENST00000600573 FBXO9Q9UK97 447 aaPredicted RBP16.88■□□□□ 0.29
PNKP-214ENST00000600573 IGHV3-64DA0A0J9YX35 117 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 B9A039 149 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 M0R233 179 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 RPS2P15880 293 aaKnown RBP16.87■□□□□ 0.29
PNKP-214ENST00000600573 UCP3P55916 312 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 TFF3Q07654 80 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 ZNF497Q6ZNH5 498 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 MOGAT3Q86VF5 341 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 DMRTC2Q8IXT2 367 aaPredicted RBP16.87■□□□□ 0.29
PNKP-214ENST00000600573 TOMM40LQ969M1 308 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 PIK3IP1Q96FE7 263 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 LIME1Q9H400 295 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 COMMD9Q9P000 198 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 PRR14LQ5THK1 2151 aa16.87■□□□□ 0.29
PNKP-214ENST00000600573 FXYD6-FXYD2A0A087WZ82 144 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 E7EQL1 145 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 SIRPB1O00241 398 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 TSC22D2O75157 780 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 DIRAS3O95661 229 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 SEC61A1P61619 476 aaKnown RBP16.86■□□□□ 0.29
PNKP-214ENST00000600573 PAX5Q02548 391 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 GSG1LQ6UXU4 331 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 ZNF767PQ75MW2 155 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 SGPP2Q8IWX5 399 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 SLC38A6Q8IZM9 456 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 OR4A4PQ8NGN8 299 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 LILRB1Q8NHL6 650 aaPredicted RBP16.86■□□□□ 0.29
PNKP-214ENST00000600573 RAB18Q9NP72 206 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 OR14J1Q9UGF5 321 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 PCDHB10Q9UN67 800 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 WIPI2Q9Y4P8 454 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 NBEAQ8NFP9 2946 aa16.86■□□□□ 0.29
PNKP-214ENST00000600573 CACNA1BQ00975 2339 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 CRYM-AS1A6NIL9 109 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 RFPL4AA6NLU0 287 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 RFPL4AL1F8VTS6 287 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 L7N2F9 121 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 IFNA2P01563 188 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 TK1P04183 234 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 IRF2P14316 349 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 GNLYP22749 145 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 NFYAP23511 347 aaPredicted RBP16.85■□□□□ 0.29
PNKP-214ENST00000600573 FXYD4P59646 89 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 TLE1Q04724 770 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 ABCA11PQ4W5N1 156 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 SLC35E4Q6ICL7 350 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 GCSAMQ8N6F7 178 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 GCM1Q9NP62 436 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 DNAJB11Q9UBS4 358 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 LRRC30A6NM36 301 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 FAM25EA8MYX2 175 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 WNT9BO14905 357 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 AADACP22760 399 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 PRDX2P32119 198 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 RBMXP38159 391 aaKnown RBP16.85■□□□□ 0.29
PNKP-214ENST00000600573 HLA-DRB3P79483 266 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 ANKRD55Q3KP44 614 aa16.85■□□□□ 0.29
PNKP-214ENST00000600573 CHD3Q12873 2000 aaKnown RBP16.84■□□□□ 0.29
PNKP-214ENST00000600573 TRAV14DV4A0A0A6YYC5 116 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 TEX13DA0A0J9YY54 714 aaPredicted RBP16.84■□□□□ 0.29
PNKP-214ENST00000600573 TMEM30CPA0ZSE6 113 aa16.84■□□□□ 0.29
PNKP-214ENST00000600573 C5orf51A6NDU8 294 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms