RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	CROCCP3	Q8IVE0	287 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	BCL6B	Q8N143	479 aa	Predicted RBP	10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	OR51D1	Q8NGF3	324 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	OR56B1	Q8NGI3	324 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	SLC25A28	Q96A46	364 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	COQ2	Q96H96	371 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	TM2D1	Q9BX74	207 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	KCNIP1	Q9NZI2	227 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	FBLN5	Q9UBX5	448 aa		10.65	□□□□□ -0.7
SRRM1-223	ENST00000600523	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523		A0A1W2PRD5	423 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523		A0A1W2PRF3	423 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523		A0A1W2PRM7	423 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	TRIM64C	A6NLI5	447 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	SPINT2	O43291	252 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	TMEM127	O75204	238 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	ARG1	P05089	322 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	CDK2	P24941	298 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	CFP	P27918	469 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	SDC2	P34741	201 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	SAA4	P35542	130 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	DLX6	P56179	175 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	CLDN12	P56749	244 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	OR10A3	P58181	314 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	MXD1	Q05195	221 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	KLRD1	Q13241	179 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	RSBN1	Q5VWQ0	802 aa	Predicted RBP	10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	BRICD5	Q6PL45	260 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	RTN4RL2	Q86UN3	420 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	PNKD	Q8N490	385 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	OR10A7	Q8NGE5	316 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	ZNF596	Q8TC21	504 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	ZFAND2B	Q8WV99	257 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	CREB3L1	Q96BA8	519 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	PHF21A	Q96BD5	680 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	GFI1	Q99684	422 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	CLEC7A	Q9BXN2	247 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	TMEM133	Q9H2Q1	129 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	DPAGT1	Q9H3H5	408 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	RIMS4	Q9H426	269 aa	Predicted RBP	10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	LIN7B	Q9HAP6	207 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	DAPK2	Q9UIK4	370 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	NF1	P21359	2839 aa		10.64	□□□□□ -0.71
SRRM1-223	ENST00000600523	UBE2QL1	A1L167	161 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	SCGN	O76038	276 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	RAB6A	P20340	208 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	NFYB	P25208	207 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	ARHGDIB	P52566	201 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	PRRX1	P54821	245 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	QRFP	P83859	136 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	PRB3	Q04118	309 aa	Predicted RBP	10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	UNC119	Q13432	240 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	ARL6IP1	Q15041	203 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	DEFB112	Q30KQ8	113 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	TMEM30B	Q3MIR4	351 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	PRAMEF5	Q5TYX0	476 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	SFXN4	Q6P4A7	337 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	ZNF497	Q6ZNH5	498 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	PLPPR1	Q8TBJ4	325 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	MRGPRD	Q8TDS7	321 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	SSMEM1	Q8WWF3	244 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	TNFRSF14	Q92956	283 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	PTX4	Q96A99	478 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	YIPF6	Q96EC8	236 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	CENPO	Q9BU64	300 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	CALY	Q9NYX4	217 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	TBL2	Q9Y4P3	447 aa	Known RBP	10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523	JMJD1C	Q15652	2540 aa		10.63	□□□□□ -0.71
SRRM1-223	ENST00000600523		A0A0U1RQK1	487 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	RNF212B	A8MTL3	300 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	ORC5	O43913	435 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	IL1A	P01583	271 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	MT-ND4	P03905	459 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	CHAT	P28329	748 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	CEACAM3	P40198	252 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	VEGFC	P49767	419 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	SCAND1	P57086	179 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523		Q6ZTK2	550 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	TCF23	Q7RTU1	214 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	GPR141	Q7Z602	305 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	ZNF554	Q86TJ5	538 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	PIP4P2	Q8N4L2	257 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	C11orf42	Q8N5U0	333 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	TMEM86B	Q8N661	226 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	OR11H6	Q8NGC7	330 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	OR13A1	Q8NGR1	328 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	NDNF	Q8TB73	568 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	CCDC107	Q8WV48	283 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	ARL11	Q969Q4	196 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	LPAR5	Q9H1C0	372 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	KCNK15	Q9H427	330 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	IDI2-AS1	Q9NZ38	188 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	ABRACL	Q9P1F3	81 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	HSF4	Q9ULV5	492 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	MGAT4A	Q9UM21	535 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	POMT1	Q9Y6A1	747 aa		10.62	□□□□□ -0.71
SRRM1-223	ENST00000600523	IGHV2-26	A0A0B4J1V2	119 aa		10.61	□□□□□ -0.71
SRRM1-223	ENST00000600523	TMEM272	A0A1B0GTI8	110 aa		10.61	□□□□□ -0.71
SRRM1-223	ENST00000600523	SHISA3	A0PJX4	238 aa		10.61	□□□□□ -0.71

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