RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 TMEM219Q86XT9 240 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 SUMF2Q8NBJ7 301 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 FBLIM1Q8WUP2 373 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 TFAP2CQ92754 450 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
IRF3-226ENST00000600453 ZNF702PQ9H963 129 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 LIN7BQ9HAP6 207 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 ZNF286AQ9HBT8 521 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 SPACA1Q9HBV2 294 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 CALYQ9NYX4 217 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 IDI2-AS1Q9NZ38 188 aa12.58□□□□□ -0.4
IRF3-226ENST00000600453 XPNPEP2O43895 674 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 IL1AP01583 271 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 GNAO1P09471 354 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 CELP19835 753 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 SERPINA2P20848 420 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
IRF3-226ENST00000600453 DEFA6Q01524 100 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 DOC2BQ14184 412 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 RBM39Q14498 530 aaKnown RBP12.57□□□□□ -0.4
IRF3-226ENST00000600453 RSBN1Q5VWQ0 802 aaPredicted RBP12.57□□□□□ -0.4
IRF3-226ENST00000600453 RNLSQ5VYX0 342 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 MS4A15Q8N5U1 240 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 NANOGP1Q8N7R0 232 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 OR13A1Q8NGR1 328 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 MYDGFQ969H8 173 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 PGLYRP3Q96LB9 341 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 MMP28Q9H239 520 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 SERTAD4Q9NUC0 356 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 SCN3BQ9NY72 215 aa12.57□□□□□ -0.4
IRF3-226ENST00000600453 TRBV5-7A0A0A0MS05 114 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 TMEM30CPA0ZSE6 113 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 NPIPB11E5RHQ5 1161 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 LY6LH3BQJ8 138 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 J3QR06 171 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 M0QZK8 103 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 ATP6V1G2O95670 118 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 FAM106CPP0CH98 169 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 GDNFP39905 211 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 ATAD3CQ5T2N8 411 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 TPTE2P1Q5T6R2 138 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 BAIAP2L2Q6UXY1 529 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 THNSL2Q86YJ6 484 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 JAGN1Q8N5M9 183 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 NKAIN3Q8N8D7 197 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 OR13C5Q8NGS8 318 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 FAM110DQ8TAY7 271 aaPredicted RBP12.56□□□□□ -0.4
IRF3-226ENST00000600453 MRGPRDQ8TDS7 321 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 RPEQ96AT9 228 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
IRF3-226ENST00000600453 MRPS28Q9Y2Q9 187 aaKnown RBP12.56□□□□□ -0.4
IRF3-226ENST00000600453 FAM172BPA6NC97 362 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 GEMIN2O14893 280 aaKnown RBP12.55□□□□□ -0.4
IRF3-226ENST00000600453 WIPF1O43516 503 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 FBXO24O75426 580 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 OR2F2O95006 317 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 MAS1P04201 325 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 VDAC2P45880 294 aaPredicted RBP12.55□□□□□ -0.4
IRF3-226ENST00000600453 BLCAPP62952 87 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 GLIPR1L1Q6UWM5 242 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 OR52M1Q8NGK5 317 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 PLPPR1Q8TBJ4 325 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 RBM14Q96PK6 669 aaKnown RBP12.55□□□□□ -0.4
IRF3-226ENST00000600453 FKBP14Q9NWM8 211 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 GHRLQ9UBU3 117 aa12.55□□□□□ -0.4
IRF3-226ENST00000600453 TRAV8-7A0A075B6U6 113 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 PNMA8CA0A1B0GUJ8 204 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 A0A1W2PPK0 400 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A10PA6NDY2 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A18PA6NE21 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A16PA6NEW6 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A20PA6NIJ5 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A7PA6NKC0 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A12PA8MX19 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A5PA8MXJ8 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A23PA8MXZ1 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 ORC5O43913 435 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 TSPAN15O95858 294 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 GLAP06280 429 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 CDK1P06493 297 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A15PP0C7V4 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A13PP0C7W8 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A14PP0C7W9 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 FAM90A24PP0C7X0 464 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
IRF3-226ENST00000600453 RAB7AP51149 207 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 MADCAM1Q13477 382 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 C6orf141Q5SZD1 244 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 AWAT2Q6E213 333 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 C11orf44Q8N8P7 122 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 RFESDQ8TAC1 157 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms