RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223		Q8IYB0	196 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	DNAAF1	Q8NEP3	725 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	PP6455	Q8WZ26	134 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	COQ2	Q96H96	371 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	C4orf36	Q96KX1	117 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	SPACA5	Q96QH8	159 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	SLC25A33	Q9BSK2	321 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	NAA50	Q9GZZ1	169 aa	Known RBP	11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	EXOSC4	Q9NPD3	245 aa	Known RBP	11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	STUB1	Q9UNE7	303 aa		11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.7	□□□□□ -0.54
IRF3-223	ENST00000599223	PF4V1	P10720	104 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	ATF1	P18846	271 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	GLIPR1	P48060	266 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	MTCP1	P56278	107 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	KRTAP10-11	P60412	298 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	SPIN3	Q5JUX0	258 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	SLC16A12	Q6ZSM3	486 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	ABHD12	Q8N2K0	398 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	OR51A4	Q8NGJ6	313 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	OR5D18	Q8NGL1	313 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	OR2G2	Q8NGZ5	317 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	CHCHD6	Q9BRQ6	235 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	LIN7B	Q9HAP6	207 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	HMG20A	Q9NP66	347 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	DPM3	Q9P2X0	92 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	GSTK1	Q9Y2Q3	226 aa		11.69	□□□□□ -0.54
IRF3-223	ENST00000599223	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	CEL	P19835	753 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	CD34	P28906	385 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	ERP29	P30040	261 aa	Known RBP	11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	ATP1B3	P54709	279 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	LSM3	P62310	102 aa	Known RBP	11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	AES	Q08117	197 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	PDZK1IP1	Q13113	114 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	CTF1	Q16619	201 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	HEPN1	Q6WQI6	88 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	UTS2B	Q765I0	119 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	C16orf82	Q7Z2V1	217 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	CCDC54	Q8NEL0	328 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	FGGY	Q96C11	551 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	C10orf35	Q96D05	121 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	DCUN1D5	Q9BTE7	237 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	PPIL3	Q9H2H8	161 aa	Known RBP	11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	FRRS1L	Q9P0K9	344 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	HHLA2	Q9UM44	414 aa		11.68	□□□□□ -0.54
IRF3-223	ENST00000599223	TRGV10	A0A0A0MS01	117 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	PNMA8C	A0A1B0GUJ8	204 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	TCRBV4S1A1T	A0A5B7	111 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	ODAM	A1E959	279 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	LY6L	H3BQJ8	138 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	KDM4B	O94953	1096 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	OR2F2	O95006	317 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	SERPINA3	P01011	423 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	PF4	P02776	101 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	SOX6	P35712	828 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	VBP1	P61758	197 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	SSX1	Q16384	188 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	C17orf58	Q2M2W7	97 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	HLA-DRB5	Q30154	266 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	CCDC58	Q4VC31	144 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	KHDC1L	Q5JSQ8	128 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	TPTE2P1	Q5T6R2	138 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223		Q6P435	159 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	RPL22L1	Q6P5R6	122 aa	Known RBP	11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	ETV3L	Q6ZN32	361 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	LHFPL2	Q6ZUX7	228 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	ZNF485	Q8NCK3	441 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	SPSB1	Q96BD6	273 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	RBM14	Q96PK6	669 aa	Known RBP	11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	COMMD4	Q9H0A8	199 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	OR51E2	Q9H255	320 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	GAL3ST2	Q9H3Q3	398 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	ISG20L2	Q9H9L3	353 aa	Known RBP	11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	ING3	Q9NXR8	418 aa		11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.67	□□□□□ -0.54
IRF3-223	ENST00000599223	SLC33A1	O00400	549 aa	Predicted RBP	11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	CYB5A	P00167	134 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	ISG15	P05161	165 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	ZNF20	P17024	532 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	GAL	P22466	123 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	PRKACB	P22694	351 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	LMO1	P25800	156 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	HOXD3	P31249	432 aa	Predicted RBP	11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	RTN4RL2	Q86UN3	420 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	MS4A15	Q8N5U1	240 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	LINC00482	Q8N8I6	264 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	OR13C9	Q8NGT0	318 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	ZNF596	Q8TC21	504 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	CORO2A	Q92828	525 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	ZNF649	Q9BS31	505 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223	DCSTAMP	Q9H295	470 aa		11.66	□□□□□ -0.54
IRF3-223	ENST00000599223		A0A087X0M5	115 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223		A0A1B0GX30	115 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	LEUTX	A8MZ59	168 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	BUB1B-PAK6	H3BSN5	160 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	CSN2	P05814	226 aa		11.65	□□□□□ -0.54
IRF3-223	ENST00000599223	ZNF44	P15621	663 aa		11.65	□□□□□ -0.54

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