RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 Q8N7P7 452 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 CORO2AQ92828 525 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 ISOC1Q96CN7 298 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 ATG5Q9H1Y0 275 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 GAL3ST2Q9H3Q3 398 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 RHBDL2Q9NX52 303 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 TAS2R3Q9NYW6 316 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 HSF4Q9ULV5 492 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 SPATA2Q9UM82 520 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 UBE2QL1A1L167 161 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 CCDC160A6NGH7 325 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 FOXI3A8MTJ6 420 aaPredicted RBP11.79□□□□□ -0.52
VRK3-213ENST00000597215 C17orf98A8MV24 154 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 H3BMQ9 156 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 CRLF1O75462 422 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 SCGNO76038 276 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 FSHBP01225 129 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 DLX6P56179 175 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 Q6ZTK2 550 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 ZNF565Q8N9K5 539 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 OR5H6Q8NGV6 325 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 SULT4A1Q9BR01 284 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 FAAP24Q9BTP7 215 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 UNKLQ9H9P5 680 aaKnown RBP11.79□□□□□ -0.52
VRK3-213ENST00000597215 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 CEPT1Q9Y6K0 416 aa11.79□□□□□ -0.52
VRK3-213ENST00000597215 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
VRK3-213ENST00000597215 TRAV40A0A0B4J280 105 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 ZNF729A6NN14 1252 aaPredicted RBP11.78□□□□□ -0.52
VRK3-213ENST00000597215 RAB27BO00194 218 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 CLPXO76031 633 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 MT-ND4P03905 459 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 SRD5A1P18405 259 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 PRTN3P24158 256 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 TMEM50BP56557 158 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 ERVFRD-1P60508 538 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 DYNC1I2Q13409 638 aaKnown RBP11.78□□□□□ -0.52
VRK3-213ENST00000597215 SPCS2Q15005 226 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 GPR157Q5UAW9 335 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 NCR3LG1Q68D85 454 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 GAPTQ8N292 157 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 OR13A1Q8NGR1 328 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 AP3S1Q92572 193 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 DYRK2Q92630 601 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 LHX4Q969G2 390 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 SLC25A38Q96DW6 304 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 PECRQ9BY49 303 aa11.78□□□□□ -0.52
VRK3-213ENST00000597215 NAV3Q8IVL0 2385 aa11.77□□□□□ -0.52
VRK3-213ENST00000597215 SVEP1Q4LDE5 3571 aa11.77□□□□□ -0.52
VRK3-213ENST00000597215 HIST1H1DP16402 221 aaKnown RBP11.77□□□□□ -0.53
VRK3-213ENST00000597215 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.53
VRK3-213ENST00000597215 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.53
VRK3-213ENST00000597215 SOX6P35712 828 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 SCGB2A2Q13296 93 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 ARL6IP1Q15041 203 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 MOGAT2Q3SYC2 334 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
VRK3-213ENST00000597215 PLAC9Q5JTB6 97 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 C11orf42Q8N5U0 333 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 MRGPRDQ8TDS7 321 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 PHF21AQ96BD5 680 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 RBM38Q9H0Z9 239 aaKnown RBP11.77□□□□□ -0.53
VRK3-213ENST00000597215 NUP50Q9UKX7 468 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
VRK3-213ENST00000597215 A0A0A6YYH2 397 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 KBTBD11-OT1A0A1B0GTJ5 212 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 A6NJ64 397 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 IGHV1-8P0DP01 117 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 GZMHP20718 246 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 CDK2P24941 298 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 BPIFB3P59826 476 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 GUCA2AQ02747 115 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 UBE2NLQ5JXB2 153 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 C6orf183Q5T699 404 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 MZT2AQ6P582 158 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 HEPN1Q6WQI6 88 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 ZNF782Q6ZMW2 699 aaPredicted RBP11.76□□□□□ -0.53
VRK3-213ENST00000597215 RTN4RL2Q86UN3 420 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 SAMD12Q8N8I0 201 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 OR4K15Q8NH41 348 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 MRPL30Q8TCC3 161 aaKnown RBP11.76□□□□□ -0.53
VRK3-213ENST00000597215 CCDC107Q8WV48 283 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 TNFRSF14Q92956 283 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 CYYR1Q96J86 154 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 CMSS1Q9BQ75 279 aaKnown RBP11.76□□□□□ -0.53
VRK3-213ENST00000597215 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
VRK3-213ENST00000597215 HEXA-AS1Q9H8Q6 139 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 CHMP1AQ9HD42 196 aaPredicted RBP11.76□□□□□ -0.53
VRK3-213ENST00000597215 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
VRK3-213ENST00000597215 CCDC59Q9P031 241 aaKnown RBP11.76□□□□□ -0.53
VRK3-213ENST00000597215 RSL24D1Q9UHA3 163 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms