RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 RFESDQ8TAC1 157 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 KCNG3Q8TAE7 436 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 C17orf50Q8WW18 174 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 DYRK2Q92630 601 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 CORO2AQ92828 525 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 SLC25A28Q96A46 364 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 CYYR1Q96J86 154 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 Q96M66 194 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 NICN1Q9BSH3 213 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 TMEM59Q9BXS4 323 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 RNF167Q9H6Y7 350 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 UNKLQ9H9P5 680 aaKnown RBP9.04□□□□□ -0.96
LIG1-211ENST00000596457 ETAA1Q9NY74 926 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 TAS2R3Q9NYW6 316 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 OR6C3Q9NZP0 311 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 SESN1Q9Y6P5 492 aa9.04□□□□□ -0.96
LIG1-211ENST00000596457 TRAV1-2A0A0B4J238 106 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 ZNF729A6NN14 1252 aaPredicted RBP9.03□□□□□ -0.96
LIG1-211ENST00000596457 MELTFP08582 738 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 FBP1P09467 338 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 FUT3P21217 361 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 GDNFP39905 211 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 KCNJ3P48549 501 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 PSMD7P51665 324 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 RPS27AP62979 156 aaKnown RBP9.03□□□□□ -0.96
LIG1-211ENST00000596457 UNC119Q13432 240 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 RBM39Q14498 530 aaKnown RBP9.03□□□□□ -0.96
LIG1-211ENST00000596457 SLC9A3R2Q15599 337 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 C2orf76Q3KRA6 126 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 PLA1AQ53H76 456 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 KIAA2026Q5HYC2 2103 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 SLC35E4Q6ICL7 350 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 CD200R1LQ6Q8B3 271 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 LHFPL4Q7Z7J7 247 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 OR4K15Q8NH41 348 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 NEDD4LQ96PU5 975 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 IFT22Q9H7X7 185 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 SPACA1Q9HBV2 294 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 STEAP1Q9UHE8 339 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 TRAPPC2LQ9UL33 140 aa9.03□□□□□ -0.96
LIG1-211ENST00000596457 MEGF8Q7Z7M0 2845 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 A0A0B4J203 849 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 TMEM14DPA8MWL7 114 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 AIPO00170 330 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 TOR1AO14656 332 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 PDCD6O75340 191 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 IGHV3-7P01780 117 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 IGHV4-59P01825 116 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 RBP4P02753 201 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 SLC2A2P11168 524 aaPredicted RBP9.02□□□□□ -0.97
LIG1-211ENST00000596457 GALP22466 123 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 BLVRBP30043 206 aaPredicted RBP9.02□□□□□ -0.97
LIG1-211ENST00000596457 VEGFCP49767 419 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 LSM3P62310 102 aaKnown RBP9.02□□□□□ -0.97
LIG1-211ENST00000596457 MXD1Q05195 221 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 C17orf58Q2M2W7 97 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 MIDNQ504T8 468 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 SIGIRRQ6IA17 410 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 OR52W1Q6IF63 320 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 ABHD12Q8N2K0 398 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 NDNFQ8TB73 568 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.97
LIG1-211ENST00000596457 FAM3DQ96BQ1 224 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 URM1Q9BTM9 101 aaKnown RBP9.02□□□□□ -0.97
LIG1-211ENST00000596457 CLEC7AQ9BXN2 247 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 ZNF696Q9H7X3 374 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 CALYQ9NYX4 217 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 IDI2-AS1Q9NZ38 188 aa9.02□□□□□ -0.97
LIG1-211ENST00000596457 IGHV2-26A0A0B4J1V2 119 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 TMEM272A0A1B0GTI8 110 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 KBTBD11-OT1A0A1B0GTJ5 212 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A10PA6NDY2 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 BTBD17A6NE02 478 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A18PA6NE21 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A16PA6NEW6 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A20PA6NIJ5 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A8PA6NJQ4 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A7PA6NKC0 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A22PA8MWA6 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A12PA8MX19 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A5PA8MXJ8 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A23PA8MXZ1 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 SOCS1O15524 211 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 KCNAB3O43448 404 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 MT-ND4P03905 459 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 CLEC2LP0C7M8 214 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A15PP0C7V4 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A13PP0C7W8 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A14PP0C7W9 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FAM90A24PP0C7X0 464 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 CD37P11049 281 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 FGF9P31371 208 aaPredicted RBP9.01□□□□□ -0.97
LIG1-211ENST00000596457 SDC2P34741 201 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 SSTR5P35346 364 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 IER3P46695 156 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 QRFPP83859 136 aa9.01□□□□□ -0.97
LIG1-211ENST00000596457 PLA2G7Q13093 441 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms