RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 HAVCR2Q8TDQ0 301 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 PYDC1Q8WXC3 89 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 DPF1Q92782 380 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 PDCD1LG2Q9BQ51 273 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 SLC6A1P30531 599 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 THBS3P49746 956 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 DIAPH2-AS1Q14236 149 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 HES1Q14469 280 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 ZSCAN26Q16670 478 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 C11orf87Q6NUJ2 197 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 ZNF529Q6P280 563 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 SLC16A12Q6ZSM3 486 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 OR2W3Q7Z3T1 314 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 Q8NFD4 153 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 MRGPRDQ8TDS7 321 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 TNFAIP8L1Q8WVP5 186 aa18.92■□□□□ 0.62
LSM4-202ENST00000593564 TSEN15Q8WW01 171 aaKnown RBP18.92■□□□□ 0.62
LSM4-202ENST00000593564 NOL4LQ96MY1 436 aaPredicted RBP18.92■□□□□ 0.62
LSM4-202ENST00000593564 E9PI62 339 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 GABRPO00591 440 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 FADS2O95864 444 aaKnown RBP18.91■□□□□ 0.62
LSM4-202ENST00000593564 RAB3AP20336 220 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 LTC4SQ16873 150 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 RFESDQ8TAC1 157 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 PLPPR1Q8TBJ4 325 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 MCRIP2Q9BUT9 160 aaKnown RBP18.91■□□□□ 0.62
LSM4-202ENST00000593564 ZFP57Q9NU63 452 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 ERVK13-1Q9NX77 482 aa18.91■□□□□ 0.62
LSM4-202ENST00000593564 SERPINE3A8MV23 424 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 MAGEB3O15480 346 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 SSTR5P35346 364 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 GNG10P50151 68 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 HNF4GQ14541 408 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 PIGYQ3MUY2 71 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 ASCL4Q6XD76 172 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 COMMD1Q8N668 190 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 OR10X1Q8NGY0 326 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 GPER1Q99527 375 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.9■□□□□ 0.62
LSM4-202ENST00000593564 GMPPBQ9Y5P6 360 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 RYR3Q15413 4870 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 TENM3Q9P273 2699 aa18.9■□□□□ 0.62
LSM4-202ENST00000593564 IGKV1D-33P01593 117 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 IGKV1-33P01594 117 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 MYCNOSP40205 109 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 GBX2P52951 348 aaPredicted RBP18.89■□□□□ 0.61
LSM4-202ENST00000593564 RSU1Q15404 277 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 C8orf86Q6ZUL3 223 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 SATL1Q86VE3 508 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 OR51A2Q8NGJ7 313 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 OR10K1Q8NGX5 313 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 Q96MT0 163 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 FAM192AQ9GZU8 254 aa18.89■□□□□ 0.61
LSM4-202ENST00000593564 H3BNX3 289 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 MPZL2O60487 215 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 IGHG2P01859 326 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 SLC35B1P78383 322 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 RAB40BQ12829 278 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 C18orf65Q6ZTR6 163 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 SLC35E3Q7Z769 313 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 CBR4Q8N4T8 237 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 RHOXF1Q8NHV9 184 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 P2RX4Q99571 388 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 DPCDQ9BVM2 203 aaPredicted RBP18.88■□□□□ 0.61
LSM4-202ENST00000593564 JAM3Q9BX67 310 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 IFT22Q9H7X7 185 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 AMBNQ9NP70 447 aa18.88■□□□□ 0.61
LSM4-202ENST00000593564 NUDT19A8MXV4 375 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 HSD17B6O14756 317 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 ZNF816Q0VGE8 651 aaPredicted RBP18.87■□□□□ 0.61
LSM4-202ENST00000593564 EBI3Q14213 229 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 NHLRC3Q5JS37 347 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 FOXRED2Q8IWF2 684 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 SUMF2Q8NBJ7 301 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 KLHL30-AS1Q8NEE0 82 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 RGP1Q92546 391 aaPredicted RBP18.87■□□□□ 0.61
LSM4-202ENST00000593564 B9D2Q9BPU9 175 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 MRPS18AQ9NVS2 196 aaKnown RBP18.87■□□□□ 0.61
LSM4-202ENST00000593564 TAS2R4Q9NYW5 299 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 LINC00527Q9UJ94 153 aa18.87■□□□□ 0.61
LSM4-202ENST00000593564 TRAV39A0A0B4J263 110 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 HTR3BO95264 441 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 GZMHP20718 246 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 SOX2P48431 317 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 CD69Q07108 199 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 STPG2Q8N412 459 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 FAM118AQ9NWS6 357 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 IL36GQ9NZH8 169 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 ZNF581Q9P0T4 197 aa18.86■□□□□ 0.61
LSM4-202ENST00000593564 IGHV1-3A0A0C4DH29 117 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 A0A1W2PPE3 182 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 CCRL2O00421 344 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 DCTN2Q13561 401 aaKnown RBP18.85■□□□□ 0.61
LSM4-202ENST00000593564 ZFP1Q6P2D0 407 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 ZNF695Q8IW36 515 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 IZUMO1Q8IYV9 350 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 OR52I1Q8NGK6 324 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 GPR148Q8TDV2 347 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 ST3GAL6Q9Y274 331 aa18.85■□□□□ 0.61
LSM4-202ENST00000593564 H0YHG0 523 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms