RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 A0A0G2JMP0 313 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 A0A0X1KG70 313 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 AVPP01185 164 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 APOA1P02647 267 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 FUT3P21217 361 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 TNFSF8P32971 234 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 SSTR5P35346 364 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 P2RX3P56373 397 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 GNB2P62879 340 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 PAX2Q02962 417 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF260Q3ZCT1 412 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 CDNFQ49AH0 187 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 KRBOX4Q5JUW0 171 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 TMEM69Q5SWH9 247 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 DCAF12L2Q5VW00 463 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 Q6ZTK2 550 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 NLRC3Q7RTR2 1065 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 SLC36A1Q7Z2H8 476 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 OR4M2Q8NGB6 313 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 MRGPRDQ8TDS7 321 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 ACOT12Q8WYK0 555 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 PTX4Q96A99 478 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 DACT3Q96B18 629 aaPredicted RBP7.94□□□□□ -1.14
DDX39A-220ENST00000593008 SNX22Q96L94 193 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 NEDD4LQ96PU5 975 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 MRI1Q9BV20 369 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 DNTTIP1Q9H147 329 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 ABCG5Q9H222 651 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 ETAA1Q9NY74 926 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 MIOXQ9UGB7 285 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 MRPS7Q9Y2R9 242 aaKnown RBP7.94□□□□□ -1.14
DDX39A-220ENST00000593008 COL6A5A8TX70 2615 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 ODAMA1E959 279 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM172BPA6NC97 362 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A10PA6NDY2 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A18PA6NE21 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A16PA6NEW6 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A20PA6NIJ5 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A8PA6NJQ4 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A7PA6NKC0 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A22PA8MWA6 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A12PA8MX19 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A5PA8MXJ8 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 A8MXK9 166 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A23PA8MXZ1 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 GPR37O15354 613 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 MMP23AO75900 390 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 HLA-DQB1P01920 261 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A15PP0C7V4 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A13PP0C7W8 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A14PP0C7W9 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM90A24PP0C7X0 464 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 RCC1P18754 421 aaPredicted RBP7.93□□□□□ -1.14
DDX39A-220ENST00000593008 GLP1RP43220 463 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 NPY4RP50391 375 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 SCAND1P57086 179 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 DGCR2P98153 550 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 FAM189A2Q15884 450 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 LTC4SQ16873 150 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 ESCO2Q56NI9 601 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 LRRC10Q5BKY1 277 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 PRAMEF5Q5TYX0 476 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 TMEM200BQ69YZ2 307 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 MZT2AQ6P582 158 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF497Q6ZNH5 498 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
DDX39A-220ENST00000593008 GDPD3Q7L5L3 318 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 LINC00596Q86U02 117 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 MFSD4AQ8N468 514 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 GVQW1Q8N7I0 195 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 SETD6Q8TBK2 473 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 ABHD1Q96SE0 405 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 PLEKHJ1Q9NW61 149 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 PTTG2Q9NZH5 202 aa7.93□□□□□ -1.14
DDX39A-220ENST00000593008 RPUSD1Q9UJJ7 312 aaKnown RBP7.93□□□□□ -1.14
DDX39A-220ENST00000593008 IGHV3OR16-10A0A075B7F0 116 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 MEIKINA0A087WXM9 373 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 METTL21EPA6NDL7 271 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 RNF212BA8MTL3 300 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 MCRIP1C9JLW8 97 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 MGST3O14880 152 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 XRCC3O43542 346 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 FOXH1O75593 365 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 NAPSAO96009 420 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 MT-ND4P03905 459 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 CD3GP09693 182 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 OMGP23515 440 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 DLX6P56179 175 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 RPL31P62899 125 aaKnown RBP7.92□□□□□ -1.14
DDX39A-220ENST00000593008 KLRD1Q13241 179 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 SCGB2A2Q13296 93 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 DYNC1I2Q13409 638 aaKnown RBP7.92□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF79Q15937 498 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 METTL11BQ5VVY1 283 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 CD276Q5ZPR3 534 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF782Q6ZMW2 699 aaPredicted RBP7.92□□□□□ -1.14
DDX39A-220ENST00000593008 CCDC190Q86UF4 302 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 PDZD9Q8IXQ8 264 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 PNKDQ8N490 385 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms