RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 FAM90A23PA8MXZ1 464 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 ODF3BA8MYP8 253 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 MT-ND4P03905 459 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 RNASE1P07998 156 aaKnown RBP12.44□□□□□ -0.42
TRIM47-206ENST00000592942 FAM90A15PP0C7V4 464 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 FAM90A13PP0C7W8 464 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 FAM90A14PP0C7W9 464 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 FAM90A24PP0C7X0 464 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 UBBP0CG47 229 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 COX7A1P24310 79 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 PAX6P26367 422 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 FGF9P31371 208 aaPredicted RBP12.44□□□□□ -0.42
TRIM47-206ENST00000592942 IER3P46695 156 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 ATAD3CQ5T2N8 411 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 C22orf42Q6IC83 251 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 HEPN1Q6WQI6 88 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 NR2C2APQ86WQ0 139 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 OR6M1Q8NGM8 313 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 MEGF9Q9H1U4 602 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 OR51E2Q9H255 320 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 TXNL4BQ9NX01 149 aaKnown RBP12.44□□□□□ -0.42
TRIM47-206ENST00000592942 OR6C3Q9NZP0 311 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 SESN1Q9Y6P5 492 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 V9GY05 133 aa12.44□□□□□ -0.42
TRIM47-206ENST00000592942 MEIKINA0A087WXM9 373 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 NPIPB11E5RHQ5 1161 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 LDLRAD4O15165 306 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 MPIG6BO95866 241 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 IGHV4-59P01825 116 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 OMGP23515 440 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 CDK2P24941 298 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 OR10A3P58181 314 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 RPS27AP62979 156 aaKnown RBP12.43□□□□□ -0.42
TRIM47-206ENST00000592942 P2RY14Q15391 338 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 TIMM50Q3ZCQ8 353 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 PRAMEF5Q5TYX0 476 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 ZNF626Q68DY1 528 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 ZNF497Q6ZNH5 498 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 GDPGP1Q6ZNW5 385 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 LHFPL4Q7Z7J7 247 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 TRAPPC6BQ86SZ2 158 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 DYNAPQ8N1N2 210 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 GAPTQ8N292 157 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 DYRK2Q92630 601 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 FUNDC2Q9BWH2 189 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 TMEM133Q9H2Q1 129 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 BATF3Q9NR55 127 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 NDUFA13Q9P0J0 144 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 ZNRD1Q9P1U0 126 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 STUB1Q9UNE7 303 aa12.43□□□□□ -0.42
TRIM47-206ENST00000592942 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
TRIM47-206ENST00000592942 CLPXO76031 633 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 BPNT1O95861 308 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 FBP1P09467 338 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 FUT3P21217 361 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 CFPP27918 469 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 CLDN12P56749 244 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 PLA2G7Q13093 441 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 C16orf87Q6PH81 154 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 FAM89BQ8N5H3 189 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 TMEM86BQ8N661 226 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 BEND2Q8NDZ0 799 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 OR13D1Q8NGV5 346 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 KCNG3Q8TAE7 436 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRIM47-206ENST00000592942 CHIAQ9BZP6 476 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 CST11Q9H112 138 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 FAM96BQ9Y3D0 163 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 PEX16Q9Y5Y5 336 aa12.42□□□□□ -0.42
TRIM47-206ENST00000592942 A0A087X0M5 115 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 IGHV2-26A0A0B4J1V2 119 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 A0A1B0GX30 115 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 TMEM89A2RUT3 159 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 A6NHS1 94 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 FOXI3A8MTJ6 420 aaPredicted RBP12.41□□□□□ -0.42
TRIM47-206ENST00000592942 MCRIP1C9JLW8 97 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 C15orf65H3BRN8 121 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 GABARAPO95166 117 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 GLAP06280 429 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 ARSBP15848 533 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 GADD45AP24522 165 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 CHATP28329 748 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 CD34P28906 385 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 PSMD7P51665 324 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 TMEM50BP56557 158 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 GPR107Q5VW38 600 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 RTN4RL2Q86UN3 420 aa12.41□□□□□ -0.42
TRIM47-206ENST00000592942 CLVS1Q8IUQ0 354 aaPredicted RBP12.41□□□□□ -0.42
TRIM47-206ENST00000592942 OR51D1Q8NGF3 324 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms