RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZNF488Q96MN9 340 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 IFT46Q9NQC8 304 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 TMEM160Q9NX00 188 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 COPZ2Q9P299 210 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 DNAJB11Q9UBS4 358 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 TANC2Q9HCD6 1990 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 ABCA1O95477 2261 aa9.91□□□□□ -0.82
DDX39A-219ENST00000592927 IGHV3OR15-7A0A075B7D8 119 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 FAM240BA0A1B0GVZ2 78 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 MCRIP1C9JLW8 97 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 SH2D1BO14796 132 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 WNT9BO14905 357 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 DEGS1O15121 323 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 SSX5O60225 188 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 MUC1P15941 1255 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-219ENST00000592927 SRD5A1P18405 259 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 DEFA6Q01524 100 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 LOXL1Q08397 574 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-219ENST00000592927 IKZF1Q13422 519 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 MICBQ29980 383 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 ACTBL2Q562R1 376 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 ATAD3CQ5T2N8 411 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 TEX36Q5VZQ5 186 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 ACP7Q6ZNF0 438 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 GDPD3Q7L5L3 318 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 NRARPQ7Z6K4 114 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 DUSP18Q8NEJ0 188 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 CLDND2Q8NHS1 167 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 NUDCD2Q8WVJ2 157 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 CMSS1Q9BQ75 279 aaKnown RBP9.9□□□□□ -0.82
DDX39A-219ENST00000592927 FAAP24Q9BTP7 215 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 WDR13Q9H1Z4 485 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-219ENST00000592927 TMEM165Q9HC07 324 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 HRASLSQ9HDD0 168 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 ELF5Q9UKW6 265 aaPredicted RBP9.9□□□□□ -0.82
DDX39A-219ENST00000592927 PCDHB10Q9UN67 800 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 DYSFO75923 2080 aa9.9□□□□□ -0.82
DDX39A-219ENST00000592927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.89□□□□□ -0.834e-14■■■■■ 34.7
DDX39A-219ENST00000592927 A0A096LNT2 108 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
DDX39A-219ENST00000592927 NDUFA2O43678 99 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 GYPAP02724 150 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 SLC6A1P30531 599 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 RFX2P48378 723 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 SNU13P55769 128 aaKnown RBP9.89□□□□□ -0.83
DDX39A-219ENST00000592927 MEF2DQ14814 521 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 SRSF7Q16629 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDX39A-219ENST00000592927 STEAP1BQ6NZ63 245 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 Q6P435 159 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 CCBE1Q6UXH8 406 aaPredicted RBP9.89□□□□□ -0.83
DDX39A-219ENST00000592927 HOGA1Q86XE5 327 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 BATF2Q8N1L9 274 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 RAB39BQ96DA2 213 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 SULT4A1Q9BR01 284 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 TMEM246Q9BRR3 403 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 DPAGT1Q9H3H5 408 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 NLKQ9UBE8 527 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 AK3Q9UIJ7 227 aa9.89□□□□□ -0.83
DDX39A-219ENST00000592927 MGAM2Q2M2H8 2515 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 MEIS3P1A6NDR6 274 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 CEACAM18A8MTB9 384 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 ZNF736B4DX44 427 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-219ENST00000592927 IGHV2-5P01817 119 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 CD74P04233 296 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 ZNF44P15621 663 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 RPS2P15880 293 aaKnown RBP9.88□□□□□ -0.83
DDX39A-219ENST00000592927 LMO1P25800 156 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 KCNJ3P48549 501 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 LMO4P61968 165 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 PLET1Q6UQ28 207 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 SUMF2Q8NBJ7 301 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 OR5T2Q8NGG2 359 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 ZNF665Q9H7R5 613 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 C12orf4Q9NQ89 552 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 IL36RNQ9UBH0 155 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 MIOXQ9UGB7 285 aa9.88□□□□□ -0.83
DDX39A-219ENST00000592927 TRBV6-6A0A0A6YYG2 114 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 TRAV24A0A0B4J272 114 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 UBE2QL1A1L167 161 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 OR2AT4A6NND4 320 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 DISC1C4P0D8 188 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 ADAM20O43506 726 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 RAB3DO95716 219 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 OR2H2O95918 312 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 HAND1O96004 215 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 CD3DP04234 171 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 PSG2P11465 335 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 AMY2BP19961 511 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 TAS2R46P59540 309 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 PDCD1Q15116 288 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 TMEM249Q2WGJ8 235 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 PLA1AQ53H76 456 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 STUMQ69YW2 141 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 Q6ZS49 121 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 IL17RELQ6ZVW7 336 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 NLRC3Q7RTR2 1065 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 RTN4RL2Q86UN3 420 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 GVQW1Q8N7I0 195 aa9.87□□□□□ -0.83
DDX39A-219ENST00000592927 BEST4Q8NFU0 473 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms