RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	C9orf66	Q5T8R8	295 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	RSBN1	Q5VWQ0	802 aa	Predicted RBP	14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	OR5M8	Q8NGP6	311 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	OR8U1	Q8NH10	309 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	HAVCR2	Q8TDQ0	301 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	MRGPRD	Q8TDS7	321 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	RBMXL1	Q96E39	390 aa	Known RBP	14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	EAF1	Q96JC9	268 aa	Predicted RBP	14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	ABCG5	Q9H222	651 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	NCOR1P1	Q9H4R4	102 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	NEK6	Q9HC98	313 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	ZNF581	Q9P0T4	197 aa		14.31	□□□□□ -0.12
CIRBP-238	ENST00000592412	IGHV3-72	A0A0B4J1Y9	119 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	TRAV39	A0A0B4J263	110 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	OR4C45	A6NMZ5	311 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412		G3V2T6	193 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	AP4M1	O00189	453 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	EBAG9	O00559	213 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	HSD17B6	O14756	317 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	CDX1	P47902	265 aa	Predicted RBP	14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	PAX5	Q02548	391 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	ZNF816	Q0VGE8	651 aa	Predicted RBP	14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	TMED1	Q13445	227 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	FHL3	Q13643	280 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	PNLIPRP3	Q17RR3	467 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	C1orf146	Q5VVC0	180 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	TGIF2LX	Q8IUE1	241 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	ZNF565	Q8N9K5	539 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412		Q8N9W7	124 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	PLSCR3	Q9NRY6	295 aa		14.3	□□□□□ -0.12
CIRBP-238	ENST00000592412	IGHV1-3	A0A0C4DH29	117 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	SEC14L6	B5MCN3	397 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	CIB2	O75838	187 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	ATP6V1E1	P36543	226 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	REG1B	P48304	166 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	CCR9	P51686	369 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	FOXE3	Q13461	319 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	GPR50	Q13585	617 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	KISS1	Q15726	138 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	PAN3	Q58A45	887 aa	Known RBP	14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	IZUMO1	Q8IYV9	350 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	OR8J1	Q8NGP2	316 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	OR13C3	Q8NGS6	347 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	CNIH3	Q8TBE1	160 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	ZCCHC4	Q9H5U6	513 aa		14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	LIN7C	Q9NUP9	197 aa	Known RBP	14.29	□□□□□ -0.12
CIRBP-238	ENST00000592412	SLC16A6	O15403	523 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	OCM2	P0CE71	109 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	OCM	P0CE72	109 aa	Predicted RBP	14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	TMEM225B	P0DP42	221 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	CHAT	P28329	748 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	C21orf33	P30042	268 aa	Predicted RBP	14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	MTNR1B	P49286	362 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	CXorf66	Q5JRM2	361 aa	Predicted RBP	14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	ELP2	Q6IA86	826 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	FAM53A	Q6NSI3	398 aa	Predicted RBP	14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	TMEM104	Q8NE00	496 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	OR10X1	Q8NGY0	326 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	MUC7	Q8TAX7	377 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	PELI1	Q96FA3	418 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	NR1H4	Q96RI1	486 aa	Predicted RBP	14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	HSPB9	Q9BQS6	159 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	GABARAPL3	Q9BY60	117 aa		14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	GAR1	Q9NY12	217 aa	Known RBP	14.28	□□□□□ -0.12
CIRBP-238	ENST00000592412	NCBP2L	A6PVI3	153 aa	Known RBP	14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	CCRL2	O00421	344 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	ELANE	P08246	267 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	HTR1A	P08908	422 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	DBT	P11182	482 aa	Known RBP	14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	ZSCAN26	Q16670	478 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	SLC16A12	Q6ZSM3	486 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	MOB3B	Q86TA1	216 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	ZDHHC13	Q8IUH4	622 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	OR10A7	Q8NGE5	316 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	BARHL1	Q9BZE3	327 aa		14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	ZNF256	Q9Y2P7	627 aa	Predicted RBP	14.27	□□□□□ -0.13
CIRBP-238	ENST00000592412	HYDIN	Q4G0P3	5121 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	ZNF736	B4DX44	427 aa	Predicted RBP	14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	SULT1B1	O43704	296 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	IGHG4	P01861	327 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	HCK	P08631	526 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	PIGY	Q3MUY2	71 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	ZNF260	Q3ZCT1	412 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	ASPHD1	Q5U4P2	390 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	ZNF691	Q5VV52	312 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	KCTD20	Q7Z5Y7	419 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	AMIGO2	Q86SJ2	522 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412		Q8NFD4	153 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	MYOZ3	Q8TDC0	251 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	C4orf3	Q8WVX3	66 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	RFK	Q969G6	155 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	ST6GALNAC6	Q969X2	333 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	RIBC2	Q9H4K1	309 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	ENOPH1	Q9UHY7	261 aa		14.26	□□□□□ -0.13
CIRBP-238	ENST00000592412	GAPDH	P04406	335 aa	Known RBP	14.25	□□□□□ -0.13
CIRBP-238	ENST00000592412	PSMB8	P28062	276 aa		14.25	□□□□□ -0.13
CIRBP-238	ENST00000592412	ALKBH1	Q13686	389 aa	Known RBP	14.25	□□□□□ -0.13
CIRBP-238	ENST00000592412	IL13RA2	Q14627	380 aa		14.25	□□□□□ -0.13
CIRBP-238	ENST00000592412	LPCAT4	Q643R3	524 aa		14.25	□□□□□ -0.13
CIRBP-238	ENST00000592412	SBSPON	Q8IVN8	264 aa		14.25	□□□□□ -0.13

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