RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HTR2CP28335 458 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 GABRA5P31644 462 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 PSMD7P51665 324 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 ARHGDIBP52566 201 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 RAG2P55895 527 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 EMX1Q04741 257 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-227ENST00000591849 SSX2Q16385 188 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 MINOS1Q5TGZ0 78 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF626Q68DY1 528 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 SLC35E4Q6ICL7 350 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 RAB12Q6IQ22 244 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 HEPN1Q6WQI6 88 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 TCF23Q7RTU1 214 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 LHFPL4Q7Z7J7 247 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 LRRTM1Q86UE6 522 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 OR11H6Q8NGC7 330 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 RFESDQ8TAC1 157 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 KCNG3Q8TAE7 436 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 PLPPR1Q8TBJ4 325 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF596Q8TC21 504 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 MRGPRDQ8TDS7 321 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 CCDC107Q8WV48 283 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 C17orf50Q8WW18 174 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 MALSU1Q96EH3 234 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 NEDD4LQ96PU5 975 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 MEGF9Q9H1U4 602 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 IFT22Q9H7X7 185 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 CALYQ9NYX4 217 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 VPREB3Q9UKI3 123 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 TRAPPC2LQ9UL33 140 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 AK6Q9Y3D8 172 aaKnown RBP8.19□□□□□ -1.1
BRCA1-227ENST00000591849 MINOS1-NBL1R4GNA1 71 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 TRAV39A0A0B4J263 110 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 A0A1B0GUS0 222 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 FAM172BPA6NC97 362 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 POM121CA8CG34 1229 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 AIPO00170 330 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 MMP23AO75900 390 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 FUT3P21217 361 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 MYL9P24844 172 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 CEACAM3P40198 252 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 COMPP49747 757 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-227ENST00000591849 GP2P55259 537 aaKnown RBP8.18□□□□□ -1.1
BRCA1-227ENST00000591849 RPL15P61313 204 aaKnown RBP8.18□□□□□ -1.1
BRCA1-227ENST00000591849 FABP5Q01469 135 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 RAB11BQ15907 218 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 NKAPLQ5M9Q1 402 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 RSBN1Q5VWQ0 802 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-227ENST00000591849 TMEM91Q6ZNR0 172 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 OR6M1Q8NGM8 313 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 OR13A1Q8NGR1 328 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 CAPSLQ8WWF8 208 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 FCGR1BQ92637 280 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 TAF15Q92804 592 aaKnown RBP eCLIP8.18□□□□□ -1.16e-6■□□□□ 11.2
BRCA1-227ENST00000591849 ARL11Q969Q4 196 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 CREB3L1Q96BA8 519 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 NCOR1P1Q9H4R4 102 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 RAB18Q9NP72 206 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 RAB9BQ9NP90 201 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 IDI2-AS1Q9NZ38 188 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 DPM3Q9P2X0 92 aa8.18□□□□□ -1.1
BRCA1-227ENST00000591849 UBE2QL1A1L167 161 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A10PA6NDY2 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A18PA6NE21 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A16PA6NEW6 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A20PA6NIJ5 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A8PA6NJQ4 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A7PA6NKC0 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A12PA8MX19 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A5PA8MXJ8 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A23PA8MXZ1 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 LEUTXA8MZ59 168 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 F2RL2O00254 374 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 CCRL2O00421 344 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 SPINT2O43291 252 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 PDCD6O75340 191 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 SC5DO75845 299 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 IL1AP01583 271 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A15PP0C7V4 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A13PP0C7W8 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A14PP0C7W9 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 FAM90A24PP0C7X0 464 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 ARSBP15848 533 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 PAX6P26367 422 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 CFPP27918 469 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 P2RY14Q15391 338 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 AANATQ16613 207 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 C17orf58Q2M2W7 97 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 C1orf100Q5SVJ3 147 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 OR10K2Q6IF99 312 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF773Q6PK81 442 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 SPARTQ8N0X7 666 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 TMEM104Q8NE00 496 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 URM1Q9BTM9 101 aaKnown RBP8.17□□□□□ -1.1
BRCA1-227ENST00000591849 TMEM59Q9BXS4 323 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 KCNIP1Q9NZI2 227 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 C1RLQ9NZP8 487 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF581Q9P0T4 197 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms