RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 ISG20L2Q9H9L3 353 aaKnown RBP9.24□□□□□ -0.93
CLIP3-204ENST00000590559 LSM4Q9Y4Z0 139 aaKnown RBP9.24□□□□□ -0.93
CLIP3-204ENST00000590559 MEIKINA0A087WXM9 373 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 E9PI62 339 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 GABRPO00591 440 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 IGKV1D-33P01593 117 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 IGKV1-33P01594 117 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 IGHV3-7P01780 117 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 CCDC159P0C7I6 412 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 TMEM225BP0DP42 221 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 TMEM11P17152 192 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 C21orf33P30042 268 aaPredicted RBP9.23□□□□□ -0.93
CLIP3-204ENST00000590559 GLP1RP43220 463 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 KCNJ3P48549 501 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 PAN3Q58A45 887 aaKnown RBP9.23□□□□□ -0.93
CLIP3-204ENST00000590559 TMEM104Q8NE00 496 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 OR5D14Q8NGL3 314 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 RAX2Q96IS3 184 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 BARHL1Q9BZE3 327 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 ING3Q9NXR8 418 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 ZNF581Q9P0T4 197 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 LINC00527Q9UJ94 153 aa9.23□□□□□ -0.93
CLIP3-204ENST00000590559 SAC3D1A6NKF1 404 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 C15orf65H3BRN8 121 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 HSPB6O14558 160 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 HCKP08631 526 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 RPSAP08865 295 aaKnown RBP9.22□□□□□ -0.93
CLIP3-204ENST00000590559 OCM2P0CE71 109 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 OCMP0CE72 109 aaPredicted RBP9.22□□□□□ -0.93
CLIP3-204ENST00000590559 SSTR5P35346 364 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 CFHR3Q02985 330 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
CLIP3-204ENST00000590559 HNF4GQ14541 408 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 NHLRC3Q5JS37 347 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 NKAPLQ5M9Q1 402 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 C1orf146Q5VVC0 180 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 SLC35E3Q7Z769 313 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 LHFPL3Q86UP9 236 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 TGIF2LXQ8IUE1 241 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 ZNF695Q8IW36 515 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 IZUMO1Q8IYV9 350 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 LINC00311Q8N616 119 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 C8orf31Q8N9H6 132 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 Q8N9W7 124 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 KLHL30-AS1Q8NEE0 82 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 OR51A2Q8NGJ7 313 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 RFESDQ8TAC1 157 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 MRGPRDQ8TDS7 321 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 RGP1Q92546 391 aaPredicted RBP9.22□□□□□ -0.93
CLIP3-204ENST00000590559 DPF1Q92782 380 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 ST6GALNAC6Q969X2 333 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 EAF1Q96JC9 268 aaPredicted RBP9.22□□□□□ -0.93
CLIP3-204ENST00000590559 PDCD1LG2Q9BQ51 273 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 ABCG5Q9H222 651 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 DCLRE1BQ9H816 532 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 NEK6Q9HC98 313 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 PLSCR3Q9NRY6 295 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 IMPAD1Q9NX62 359 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 AASSQ9UDR5 926 aa9.22□□□□□ -0.93
CLIP3-204ENST00000590559 STARD9Q9P2P6 4700 aa9.21□□□□□ -0.93
CLIP3-204ENST00000590559 IGHV1-3A0A0C4DH29 117 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 TMEM212A6NML5 194 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 SERPINE3A8MV23 424 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 HSD17B6O14756 317 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 GNG10P50151 68 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 DGCR2P98153 550 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 HES1Q14469 280 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 ZSCAN26Q16670 478 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 PIGYQ3MUY2 71 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 OR52M1Q8NGK5 317 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 OR5AK2Q8NH90 309 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 DUX3Q96PT4 197 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 NR1H4Q96RI1 486 aaPredicted RBP9.21□□□□□ -0.94
CLIP3-204ENST00000590559 ALG8Q9BVK2 526 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 LIN7CQ9NUP9 197 aaKnown RBP9.21□□□□□ -0.94
CLIP3-204ENST00000590559 MRPS18AQ9NVS2 196 aaKnown RBP9.21□□□□□ -0.94
CLIP3-204ENST00000590559 ERVK13-1Q9NX77 482 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 IL36GQ9NZH8 169 aa9.21□□□□□ -0.94
CLIP3-204ENST00000590559 ZMAT5Q9UDW3 170 aaKnown RBP9.21□□□□□ -0.94
CLIP3-204ENST00000590559 TRAV39A0A0B4J263 110 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 A0A1W2PPE3 182 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 H3BNX3 289 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 CCL24O00175 119 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 AP4M1O00189 453 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 EI24O14681 340 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 RAMP3O60896 148 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 GAPDHP04406 335 aaKnown RBP9.2□□□□□ -0.94
CLIP3-204ENST00000590559 RPLP1P05386 114 aaKnown RBP9.2□□□□□ -0.94
CLIP3-204ENST00000590559 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
CLIP3-204ENST00000590559 RAB3AP20336 220 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 GZMHP20718 246 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 VHLP40337 213 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 GPR12P47775 334 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 CDX1P47902 265 aaPredicted RBP9.2□□□□□ -0.94
CLIP3-204ENST00000590559 SLC35B1P78383 322 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 MRPL28Q13084 256 aaKnown RBP9.2□□□□□ -0.94
CLIP3-204ENST00000590559 KIR2DS1Q14954 304 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 PNLIPRP3Q17RR3 467 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 KLHL22Q53GT1 634 aa9.2□□□□□ -0.94
CLIP3-204ENST00000590559 TEX38Q6PEX7 206 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms