RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TMUB2Q71RG4 321 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 STPG2Q8N412 459 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 OR2AK2Q8NG84 335 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 OR52H1Q8NGJ2 320 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 OR6M1Q8NGM8 313 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 OR4K13Q8NH42 304 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 OR1S1Q8NH92 325 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 MOSPD2Q8NHP6 518 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 ST8SIA4Q92187 359 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 TSPAN32Q96QS1 320 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 GAL3ST1Q99999 423 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 PDCD1LG2Q9BQ51 273 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 UPB1Q9UBR1 384 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 KLK11Q9UBX7 282 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 MRM2Q9UI43 246 aaKnown RBP6.37□□□□□ -1.39
SMAD4-209ENST00000589941 MRPS7Q9Y2R9 242 aaKnown RBP6.37□□□□□ -1.39
SMAD4-209ENST00000589941 FLVCR1Q9Y5Y0 555 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 SESN1Q9Y6P5 492 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 U3KQK5 164 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 PPIAL4EA0A075B759 164 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 PPIAL4CA0A0B4J2A2 164 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 TMEM272A0A1B0GTI8 110 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 GGT3PA6NGU5 568 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 A6NJ64 397 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 ACOD1A6NK06 481 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 RFPL4AA6NLU0 287 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 TMEM212A6NML5 194 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 PPIAL4DF5H284 164 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 F5H5P2 479 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 RFPL4AL1F8VTS6 287 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 TOR1AO14656 332 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 PHYHO14832 338 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 KHDRBS3O75525 346 aaKnown RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 IGHMP01871 453 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 CD74P04233 296 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 CD14P08571 375 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 UBBP0CG47 229 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 UBCP0CG48 685 aaKnown RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 PPIAL4FP0DN26 164 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 ANXA7P20073 488 aaKnown RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 CD80P33681 288 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 PSMB10P40306 273 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 NAA10P41227 235 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 HCCSP53701 268 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 H2BFSP57053 126 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 RPS27AP62979 156 aaKnown RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 GK2Q14410 553 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF345Q14585 488 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 CCDC144NLQ6NUI1 221 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 LPCAT3Q6P1A2 487 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 C3orf33Q6P1S2 294 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 KRT77Q7Z794 578 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 OR4C16Q8NGL9 310 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 OR2G2Q8NGZ5 317 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 GPR119Q8TDV5 335 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 GPX8Q8TED1 209 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 BCL2L2Q92843 193 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-209ENST00000589941 ARL5BQ96KC2 179 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 C4orf45Q96LM5 186 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 ALG12Q9BV10 488 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 SCPEP1Q9HB40 452 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 DCAF16Q9NXF7 216 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 NKIRAS2Q9NYR9 191 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 KCNK7Q9Y2U2 307 aa6.36□□□□□ -1.39
SMAD4-209ENST00000589941 TRAV14DV4A0A0A6YYC5 116 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 A0A0D9SG52 128 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 A0A1W2PPK0 400 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 SULT2B1O00204 365 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 SLC17A2O00624 439 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 LDLRAD4O15165 306 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 MAGEB4O15481 346 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 SERPINI2O75830 405 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 RBBP9O75884 186 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 IGHV4-59P01825 116 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 ASAH2BP0C7U1 165 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 AKAIN1P0CW23 69 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 PNMTP11086 282 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 SLC25A4P12235 298 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 IGLL1P15814 213 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 MGMTP16455 207 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 ALOX5APP20292 161 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 CDKN2AP42771 156 aaKnown RBP6.35□□□□□ -1.39
SMAD4-209ENST00000589941 CENPAP49450 140 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 TGFBR3Q03167 851 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF74Q16587 644 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 KLHL26Q53HC5 615 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 LY6G6FQ5SQ64 297 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 GSG1LQ6UXU4 331 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 NHLRC1Q6VVB1 395 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 ADAMTSL5Q6ZMM2 481 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 TMPPEQ6ZT21 453 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 MOB3CQ70IA8 216 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 FAM220AQ7Z4H9 259 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 LYPD6Q86Y78 171 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 PDZD9Q8IXQ8 264 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 KCNRGQ8N5I3 272 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 TMEM229BQ8NBD8 167 aa6.35□□□□□ -1.39
SMAD4-209ENST00000589941 OR10S1Q8NGN2 331 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms