RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 RAB32Q13637 225 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 SNTB1Q13884 538 aaKnown RBP8.48□□□□□ -1.05
VPS25-202ENST00000589219 IAH1Q2TAA2 248 aaPredicted RBP8.48□□□□□ -1.05
VPS25-202ENST00000589219 GGNBP1Q5YKI7 109 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 OR2T2Q6IF00 324 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 FIP1L1Q6UN15 594 aaKnown RBP8.48□□□□□ -1.05
VPS25-202ENST00000589219 Q6ZPA2 131 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 LIAT1Q6ZQX7 453 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 LURAP1LQ8IV03 231 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 GCNT2Q8N0V5 402 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 FAM58AQ8N1B3 248 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 EIF4E3Q8N5X7 224 aaKnown RBP8.48□□□□□ -1.05
VPS25-202ENST00000589219 CNEP1R1Q8N9A8 125 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 C9orf106Q8NAJ2 232 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 BHLHE23Q8NDY6 225 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 OR1S1Q8NH92 325 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
VPS25-202ENST00000589219 OR10C1Q96KK4 312 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 CXorf58Q96LI9 332 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 CABLES2Q9BTV7 478 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 RNF126Q9BV68 326 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 DNTTIP1Q9H147 329 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 WDR13Q9H1Z4 485 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 LIME1Q9H400 295 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 TREM2Q9NZC2 230 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 ZNF629Q9UEG4 869 aaPredicted RBP8.48□□□□□ -1.05
VPS25-202ENST00000589219 NUP50Q9UKX7 468 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 AMDHD2Q9Y303 409 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 ATP23Q9Y6H3 246 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 CENPEQ02224 2701 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
VPS25-202ENST00000589219 NOTCH2Q04721 2471 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 MBD3L4A6NDZ8 208 aaPredicted RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 MBD3L3A6NE82 208 aaPredicted RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 MBD3L5A6NJ08 208 aaPredicted RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 KRBOX1C9JBD0 128 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 NPIPB11E5RHQ5 1161 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 H0YIZ8 118 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 TUSC2O75896 110 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 LYZL6O75951 148 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 CLDN1O95832 211 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 IGKV3-15P01624 115 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 OR5AC1P0C628 307 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 CA6P23280 308 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 KIR2DL2P43627 348 aaPredicted RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 PAN3Q58A45 887 aaKnown RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 ZNF880Q6PDB4 577 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 BRICD5Q6PL45 260 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 FAM169BQ8N8A8 192 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 ZNF565Q8N9K5 539 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 SUMF2Q8NBJ7 301 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 OR5T2Q8NGG2 359 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 OR4A4PQ8NGN8 299 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 MBD3L2Q8NHZ7 208 aaPredicted RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 SLC25A40Q8TBP6 338 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 MRPL30Q8TCC3 161 aaKnown RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 MRPL24Q96A35 216 aaKnown RBP8.47□□□□□ -1.05
VPS25-202ENST00000589219 SPIN2AQ99865 258 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 SPIN2BQ9BPZ2 258 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 REG4Q9BYZ8 158 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 OR51B6Q9H340 312 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 PRR13Q9NZ81 148 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 OR5AC2Q9NZP5 309 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 PROCRQ9UNN8 238 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 TMED3Q9Y3Q3 217 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 ARHGAP21Q5T5U3 1957 aa8.47□□□□□ -1.05
VPS25-202ENST00000589219 MPTX1A8MV57 137 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 GPR31O00270 319 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 LILRA1O75019 489 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 DEDDO75618 318 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 CRYABP02511 175 aaKnown RBP8.46□□□□□ -1.06
VPS25-202ENST00000589219 CELA3BP08861 270 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 FGF2P09038 288 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 ACAA1P09110 424 aaPredicted RBP8.46□□□□□ -1.06
VPS25-202ENST00000589219 PGA5P0DJD9 388 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 DUSP1P28562 367 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 S100GP29377 79 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 P2RY6Q15077 328 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 PDCD1Q15116 288 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 PHLDA2Q53GA4 152 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 BEX5Q5H9J7 111 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 FAM76BQ5HYJ3 339 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 SPIN3Q5JUX0 258 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 SPATA46Q5T0L3 261 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
VPS25-202ENST00000589219 MYPOPQ86VE0 399 aaPredicted RBP8.46□□□□□ -1.06
VPS25-202ENST00000589219 BAP18Q8IXM2 172 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 BVESQ8NE79 360 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 OR1J1Q8NGS3 322 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 MSI2Q96DH6 328 aaKnown RBP8.46□□□□□ -1.06
VPS25-202ENST00000589219 ABHD14BQ96IU4 210 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 C18orf12Q96KH6 178 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 SLX1AQ9BQ83 275 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 NRIP2Q9BQI9 281 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 BCL2L14Q9BZR8 327 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 OR2J1Q9GZK6 312 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 PLEKHA2Q9HB19 425 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 PLSCR4Q9NRQ2 329 aa8.46□□□□□ -1.06
VPS25-202ENST00000589219 IL36RNQ9UBH0 155 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms