RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 EMG1Q92979 244 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 RAB24Q969Q5 203 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ISOC2Q96AB3 205 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 R3HDM4Q96D70 268 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 MSI2Q96DH6 328 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 FBXO17Q96EF6 278 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 MARS2Q96GW9 593 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 RCC1LQ96I51 464 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 VSTM2LQ96N03 204 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 WFIKKN1Q96NZ8 548 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 NEU1Q99519 415 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 NRTNQ99748 197 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 NDUFAF3Q9BU61 184 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 HIPK2Q9H2X6 1198 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C5orf66Q9H5L9 145 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 ELOVL3Q9HB03 270 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 Q9N2J8 555 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C19orf12Q9NSK7 152 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 FBXO34Q9NWN3 711 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 VSX1Q9NZR4 365 aaPredicted RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 KIAA1456Q9P272 454 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 DNAH1Q9P2D7 4330 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 GRHPRQ9UBQ7 328 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 C14orf166Q9Y224 244 aaKnown RBP3.57□□□□□ -1.84
LIG3-211ENST00000588713 AMDHD2Q9Y303 409 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 LRP12Q9Y561 859 aa3.57□□□□□ -1.84
LIG3-211ENST00000588713 A0A087X0M5 115 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 TMEM269A0A1B0GVZ9 245 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 A0A1B0GX30 115 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 FITM1A5D6W6 292 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 MBD3L3A6NE82 208 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 ZNF724A8MTY0 619 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 A8MVM7 634 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 B4DEV8 164 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 E5RGE8 158 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 CYR61O00622 381 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 DVL1O14640 695 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 HS3ST1O14792 307 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 AGPAT2O15120 278 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 MT-ATP6P00846 226 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 IGKV1D-16P01601 117 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 BGLAPP02818 100 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SOD3P08294 240 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 CT62P0C5K7 136 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 OR5AC1P0C628 307 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 USF1P22415 310 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 CRABP1P29762 137 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 AKR1C3P42330 323 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 RPS10P46783 165 aaKnown RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 CYB561P49447 251 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 NUTF2P61970 127 aaKnown RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 RNF4P78317 190 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 BTG2P78543 158 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 DLK1P80370 383 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 IGLV3-21P80748 117 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 PSG6Q00889 435 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ZNF616Q08AN1 781 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 PNRC1Q12796 327 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 SKP2Q13309 424 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 UNC119Q13432 240 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 RUNX2Q13950 521 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 EIF2B1Q14232 305 aaKnown RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 IL13RA2Q14627 380 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 EXOSC7Q15024 291 aaKnown RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 PPA1Q15181 289 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SLC9A3R2Q15599 337 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SGCBQ16585 318 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ZNF674Q2M3X9 581 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ANKRD55Q3KP44 614 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 DEFB134Q4QY38 66 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 AKIRIN2Q53H80 203 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 KHDC3LQ587J8 217 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 GPR157Q5UAW9 335 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ADAM5Q6NVV9 412 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ZNF529Q6P280 563 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 POMZP3Q6PJE2 187 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SLC22A25Q6T423 547 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 DPPA3Q6W0C5 159 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 NPSR1Q6W5P4 371 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SLC35D2Q76EJ3 337 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SLC35E3Q7Z769 313 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 FAM219AQ8IW50 185 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ZNF101Q8IZC7 436 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 CA13Q8N1Q1 262 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ZFP62Q8NB50 900 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 OR4D6Q8NGJ1 314 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 OR51A2Q8NGJ7 313 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 OR10G4Q8NGN3 311 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 C16orf52Q8NHV5 167 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 MBD3L2Q8NHZ7 208 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 RNASEH2CQ8TDP1 164 aaKnown RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 SLC25A43Q8WUT9 341 aaPredicted RBP3.56□□□□□ -1.84
LIG3-211ENST00000588713 HPSE2Q8WWQ2 592 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 SARAFQ96BY9 339 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 ABHD14BQ96IU4 210 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 RHOVQ96L33 236 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 TSSK2Q96PF2 358 aa3.56□□□□□ -1.84
LIG3-211ENST00000588713 AMELYQ99218 206 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms