RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ZNRF1Q8ND25 227 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 TERB2Q8NHR7 220 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 RAB1BQ9H0U4 201 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 ALG5Q9Y673 324 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 PPIAL4EA0A075B759 164 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 TMEM30CPA0ZSE6 113 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 PPIAL4DF5H284 164 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 K7N7A8 449 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 FABP7O15540 132 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 DHFRP00374 187 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 GYPAP02724 150 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 SCTP09683 121 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 PPIAL4FP0DN26 164 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 AADACL3Q5VUY0 350 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 ZNF561Q8N587 486 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 CCDC107Q8WV48 283 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 GAFA1Q96PS6 74 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 LIME1Q9H400 295 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 PPIAL4AQ9Y536 164 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 TENM4Q6N022 2769 aa21.72■■□□□ 1.07
SCAMP4-210ENST00000588555 TRAV38-1A0A0B4J264 116 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 CEACAM18A8MTB9 384 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 CLDN1O95832 211 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 HERPUD1Q15011 391 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 IGSF11Q5DX21 431 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 ATPAF1Q5TC12 328 aaPredicted RBP21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 TMEM17Q86X19 198 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 KIF25Q9UIL4 384 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 TRAV39A0A0B4J263 110 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 A0A1B0GW55 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L2P0CJ85 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L3P0CJ86 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L4P0CJ87 422 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L5P0CJ88 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L6P0CJ89 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L7P0CJ90 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 SELLP14151 372 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 COL8A2P25067 703 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 HLA-DRB3P79483 266 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 CARTPTQ16568 116 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 HFEQ30201 348 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4L9Q6RFH8 374 aaPredicted RBP21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DHRS11Q6UWP2 260 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 DUX4Q9UBX2 424 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 TRAPPC2LQ9UL33 140 aa21.71■■□□□ 1.07
SCAMP4-210ENST00000588555 IGKV1-6A0A0C4DH72 117 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 C7orf66A4D0T2 115 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 LYNX1G3V0Z9 82 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 TK1P04183 234 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 LYNX1P0DP58 116 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 GIMAP1Q8WWP7 306 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 CCL13Q99616 98 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 ZNF665Q9H7R5 613 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 VSIG4Q9Y279 399 aa21.7■■□□□ 1.06
SCAMP4-210ENST00000588555 TNFRSF13BO14836 293 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 MGST3O14880 152 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 RP2O75695 350 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 ANXA7P20073 488 aaKnown RBP21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 GLIPR1P48060 266 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 KRBOX4Q5JUW0 171 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 OR6F1Q8NGZ6 308 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 PPP1R35Q8TAP8 253 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 BEX2Q9BXY8 128 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 BEX1Q9HBH7 125 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 MGAT4AQ9UM21 535 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 OR5H14A6NHG9 310 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 SIGLEC5O15389 551 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 TLE4Q04727 773 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 TPRX1Q8N7U7 411 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 ZDHHC22Q8N966 263 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 NEU4Q8WWR8 484 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 ZNF2Q9BSG1 426 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 DNTTIP1Q9H147 329 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 GHITMQ9H3K2 345 aa21.69■■□□□ 1.06
SCAMP4-210ENST00000588555 A0A0A6YYJ9 748 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 RLN1P04808 185 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 PLA2G2AP14555 144 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 NPY4RP50391 375 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 HMGN3Q15651 99 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 SLC36A1Q7Z2H8 476 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 FAM216BQ8N7L0 139 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 OR4A4PQ8NGN8 299 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 MARCH1Q8TCQ1 289 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 CABLES2Q9BTV7 478 aa21.68■■□□□ 1.06
SCAMP4-210ENST00000588555 MEIKINA0A087WXM9 373 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 MRPS11P82912 194 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 PEG10Q86TG7 708 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 CHAC2Q8WUX2 184 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 TMPRSS13Q9BYE2 586 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 FAM234AQ9H0X4 552 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 PLEKHF2Q9H8W4 249 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 DLL4Q9NR61 685 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 ZNF221Q9UK13 617 aa21.67■■□□□ 1.06
SCAMP4-210ENST00000588555 PRAF2O60831 178 aa21.66■■□□□ 1.06
SCAMP4-210ENST00000588555 LY6HO94772 140 aa21.66■■□□□ 1.06
SCAMP4-210ENST00000588555 VSIG10L2P0DP72 767 aa21.66■■□□□ 1.06
SCAMP4-210ENST00000588555 SEC61A1P61619 476 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-210ENST00000588555 IL13RA1P78552 427 aa21.66■■□□□ 1.06
SCAMP4-210ENST00000588555 EDDM3AQ14507 147 aa21.66■■□□□ 1.06
SCAMP4-210ENST00000588555 OR5D13Q8NGL4 314 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms