RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	RFPL3S	P0C7P2	107 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SLC25A6	P12236	298 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	EDN3	P14138	238 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	FOLR2	P14207	255 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ADCYAP1	P18509	176 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	NKX2-1	P43699	371 aa	Predicted RBP	12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	AKR1C2	P52895	323 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	AKR1C1	Q04828	323 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516		Q0VFX4	171 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TSC22D1	Q15714	1073 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	HFE	Q30201	348 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TSPO2	Q5TGU0	170 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	DPPA3	Q6W0C5	159 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	LYZL2	Q7Z4W2	148 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	BHLHE23	Q8NDY6	225 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	OR4D5	Q8NGN0	318 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	PKIB	Q9C010	78 aa		12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.08	□□□□□ -0.48
NEDD4L-223	ENST00000588516	CLEC18A	A5D8T8	446 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	KLRC4-KLRK1	H3BQV0	150 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	PITX3	O75364	302 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	NAPSA	O96009	420 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	WNT2	P09544	360 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	CD80	P33681	288 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SNCA	P37840	140 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	MDH2	P40926	338 aa	Known RBP	12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	LHX2	P50458	406 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RAB5B	P61020	215 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RAB1A	P62820	205 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	OR8G1	Q15617	311 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RNF212	Q495C1	297 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	DMRTC1	Q5HYR2	192 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	MOB1B	Q7L9L4	216 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	OR2C3	Q8N628	320 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	CLEC18C	Q8NCF0	446 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	OR56B2P	Q8NGI1	322 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	C19orf12	Q9NSK7	152 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RCL1	Q9Y2P8	373 aa	Known RBP	12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ATP23	Q9Y6H3	246 aa		12.07	□□□□□ -0.48
NEDD4L-223	ENST00000588516	WRB	O00258	174 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	PATE4	P0C8F1	98 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RCC1	P18754	421 aa	Predicted RBP	12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	VDAC1	P21796	283 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	NTF4	P34130	210 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	APLNR	P35414	380 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RAB13	P51153	203 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ARHGDIB	P52566	201 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	PLGLB1	Q02325	96 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	MRPL49	Q13405	166 aa	Known RBP	12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	GUK1	Q16774	197 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SP6	Q3SY56	376 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SPIN3	Q5JUX0	258 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	FAM219A	Q8IW50	185 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516		Q8IYB0	196 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	OR5D13	Q8NGL4	314 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	NEK7	Q8TDX7	302 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ABHD3	Q8WU67	409 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	PSMF1	Q92530	271 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	FER1L6-AS2	Q96M78	137 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	LIME1	Q9H400	295 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ZNF703	Q9H7S9	590 aa	Predicted RBP	12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	IFT22	Q9H7X7	185 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ASCL3	Q9NQ33	180 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SLC7A10	Q9NS82	523 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	DEPP	Q9NTK1	212 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	CACFD1	Q9UGQ2	172 aa		12.06	□□□□□ -0.48
NEDD4L-223	ENST00000588516	C5orf49	A4QMS7	147 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ZNF732	B4DXR9	585 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516		H0Y980	276 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TUSC2	O75896	110 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	DFFB	O76075	338 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	HBE1	P02100	147 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	UCP1	P25874	307 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	HAAO	P46952	286 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	CLDN18	P56856	261 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	GNG3	P63215	75 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TLE1	Q04724	770 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RHEB	Q15382	184 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TBC1D26	Q86UD7	250 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	DTX1	Q86Y01	620 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SLC35G3	Q8N808	338 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	CPEB3	Q8NE35	698 aa	Known RBP	12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	BOD1	Q96IK1	185 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SMIM3	Q9BZL3	60 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SPRY4	Q9C004	299 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	KCNJ16	Q9NPI9	418 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TREM2	Q9NZC2	230 aa		12.05	□□□□□ -0.48
NEDD4L-223	ENST00000588516	UBR5	O95071	2799 aa	Predicted RBP	12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	C1orf196	B1AJZ1	125 aa		12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	DEGS1	O15121	323 aa		12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	SS18L1	O75177	396 aa	Predicted RBP	12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	MT-ND4L	P03901	98 aa		12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	BCL3	P20749	454 aa		12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	NPBWR1	P48145	328 aa		12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	RPS18	P62269	152 aa	Known RBP	12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	ZNF616	Q08AN1	781 aa		12.04	□□□□□ -0.48
NEDD4L-223	ENST00000588516	IL24	Q13007	206 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms