RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SRP14P37108 136 aaKnown RBP7.46□□□□□ -1.22
CIRBP-218ENST00000588344 GLIPR1P48060 266 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 TMEM50BP56557 158 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 ERVFRD-1P60508 538 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 PITPNAQ00169 270 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 ATXN7L3Q14CW9 347 aaPredicted RBP7.46□□□□□ -1.22
CIRBP-218ENST00000588344 TMEM30BQ3MIR4 351 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 NKAPLQ5M9Q1 402 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 C6orf183Q5T699 404 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 GPR157Q5UAW9 335 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 SIGIRRQ6IA17 410 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 FGFRL1Q8N441 504 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 DGCR14Q96DF8 476 aaKnown RBP7.46□□□□□ -1.22
CIRBP-218ENST00000588344 COQ2Q96H96 371 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 FAAP24Q9BTP7 215 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 NAA50Q9GZZ1 169 aaKnown RBP7.46□□□□□ -1.22
CIRBP-218ENST00000588344 SIRPDQ9H106 197 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 RHBDL2Q9NX52 303 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 KCNIP1Q9NZI2 227 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 RSL24D1Q9UHA3 163 aaKnown RBP7.46□□□□□ -1.22
CIRBP-218ENST00000588344 NUP50Q9UKX7 468 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 TRAPPC2LQ9UL33 140 aa7.46□□□□□ -1.22
CIRBP-218ENST00000588344 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 H3BMQ9 156 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 RAB27BO00194 218 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 SPINT2O43291 252 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 TPPPO94811 219 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 APOA1P02647 267 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
CIRBP-218ENST00000588344 SRD5A1P18405 259 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 TGFBR1P36897 503 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 TALDO1P37837 337 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 UBE2E1P51965 193 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
CIRBP-218ENST00000588344 UBE2NLQ5JXB2 153 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 HEPN1Q6WQI6 88 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 MOB1BQ7L9L4 216 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 C6orf201Q7Z4U5 140 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 VMO1Q7Z5L0 202 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 RTN4RL2Q86UN3 420 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 OR13D1Q8NGV5 346 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 LGALS14Q8TCE9 139 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 ARHGAP5-AS1Q96IT6 56 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 SULT4A1Q9BR01 284 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 NICN1Q9BSH3 213 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 PCGF1Q9BSM1 259 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.45□□□□□ -1.22
CIRBP-218ENST00000588344 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
CIRBP-218ENST00000588344 CCDC59Q9P031 241 aaKnown RBP7.45□□□□□ -1.22
CIRBP-218ENST00000588344 KIF25Q9UIL4 384 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 SESN1Q9Y6P5 492 aa7.45□□□□□ -1.22
CIRBP-218ENST00000588344 CHD3Q12873 2000 aaKnown RBP7.45□□□□□ -1.22
CIRBP-218ENST00000588344 A0A0A6YYD4 124 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 A0A0B4J203 849 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 UBE2QL1A1L167 161 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 INAFM1C9JVW0 142 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 NPIPB11E5RHQ5 1161 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 XRCC3O43542 346 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CLPXO76031 633 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 AVPP01185 164 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CD3GP09693 182 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 FAM157CP0CG43 387 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CGB3P0DN86 165 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CGB7P0DN87 165 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 IGHV1-8P0DP01 117 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 HIST1H1DP16402 221 aaKnown RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CCL3L1P16619 93 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 MNDAP41218 407 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 EFNB2P52799 333 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 DLX6P56179 175 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 ZNF273Q14593 569 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 SPCS2Q15005 226 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 PNLIPRP3Q17RR3 467 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CDNFQ49AH0 187 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 C11orf42Q8N5U0 333 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 Q8N7P7 452 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 TPRX1Q8N7U7 411 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 SAMD12Q8N8I0 201 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 OR52M1Q8NGK5 317 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 NDNFQ8TB73 568 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 PLPPR1Q8TBJ4 325 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 DYNC2LI1Q8TCX1 351 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 C15orf40Q8WUR7 153 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CREB3L1Q96BA8 519 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CMSS1Q9BQ75 279 aaKnown RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 PECRQ9BY49 303 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 MS4A7Q9GZW8 240 aaPredicted RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 RBM38Q9H0Z9 239 aaKnown RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 KCNK15Q9H427 330 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CHMP1AQ9HD42 196 aaPredicted RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 C12orf4Q9NQ89 552 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 ING3Q9NXR8 418 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 CALYQ9NYX4 217 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 ZNF581Q9P0T4 197 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 COMMD3Q9UBI1 195 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 RABL2AQ9UBK7 228 aaPredicted RBP7.44□□□□□ -1.22
CIRBP-218ENST00000588344 ADAM30Q9UKF2 790 aa7.44□□□□□ -1.22
CIRBP-218ENST00000588344 RABL2BQ9UNT1 228 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms