RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 DCAF12L2Q5VW00 463 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 DMRTC2Q8IXT2 367 aaPredicted RBP13.91□□□□□ -0.18
NFIX-210ENST00000588228 SLC38A6Q8IZM9 456 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 GCSAMQ8N6F7 178 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 OR11H4Q8NGC9 324 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 PLPPR2Q96GM1 343 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 MBNL3Q9NUK0 354 aaKnown RBP13.91□□□□□ -0.18
NFIX-210ENST00000588228 TRAPPC2LQ9UL33 140 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 PCDHB10Q9UN67 800 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 WIPI2Q9Y4P8 454 aa13.91□□□□□ -0.18
NFIX-210ENST00000588228 IGKV1-6A0A0C4DH72 117 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
NFIX-210ENST00000588228 BET1O15155 118 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 LHBP01229 141 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 SLC35E4Q6ICL7 350 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 COQ8AQ8NI60 647 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 PIK3IP1Q96FE7 263 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 CABLES2Q9BTV7 478 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 KCNJ16Q9NPI9 418 aa13.9□□□□□ -0.18
NFIX-210ENST00000588228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.89□□□□□ -0.19
NFIX-210ENST00000588228 TMEM30CPA0ZSE6 113 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 CRYM-AS1A6NIL9 109 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 DBX1A6NMT0 343 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 TUSC2O75896 110 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 CD3EP07766 207 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 CD55P08174 381 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 SRSF4Q08170 494 aaKnown RBP13.89□□□□□ -0.19
NFIX-210ENST00000588228 SLC9A3R2Q15599 337 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 SGPP2Q8IWX5 399 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 LINC01560Q8TB33 94 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 Q8TCH9 128 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 GCM1Q9NP62 436 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 PLSCR3Q9NRY6 295 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 DNAJB11Q9UBS4 358 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 HEATR1Q9H583 2144 aaKnown RBP13.89□□□□□ -0.19
NFIX-210ENST00000588228 POLEQ07864 2286 aa13.89□□□□□ -0.19
NFIX-210ENST00000588228 C17orf100A8MU93 164 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 PSG2P11465 335 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 GRNP28799 593 aaKnown RBP13.88□□□□□ -0.19
NFIX-210ENST00000588228 PRDX2P32119 198 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 SERPINF1P36955 418 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 OR3A1P47881 315 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 PIGPP57054 158 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 COL10A1Q03692 680 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 SNTB1Q13884 538 aaKnown RBP13.88□□□□□ -0.19
NFIX-210ENST00000588228 CDSNQ15517 529 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 ABCA11PQ4W5N1 156 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 Q5BKY6 102 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 LAMTOR1Q6IAA8 161 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 KCTD9Q7L273 389 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 C5orf24Q7Z6I8 188 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 C9orf62Q8N4C0 152 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 CD177Q8N6Q3 437 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 WDR89Q96FK6 387 aaPredicted RBP13.88□□□□□ -0.19
NFIX-210ENST00000588228 RSRP1Q9BUV0 290 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 RNF7Q9UBF6 113 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 CHD8Q9HCK8 2581 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 NPIPB11E5RHQ5 1161 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 E7EQL1 145 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 M0R233 179 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 IFNA2P01563 188 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 PAX5Q02548 391 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 TESK1Q15569 626 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 HMGN3Q15651 99 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 OR11L1Q8NGX0 322 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 HSPB11Q9Y547 144 aa13.88□□□□□ -0.19
NFIX-210ENST00000588228 IGKV1D-17A0A075B6S4 117 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 TEX13DA0A0J9YY54 714 aaPredicted RBP13.87□□□□□ -0.19
NFIX-210ENST00000588228 TNFRSF1AP19438 455 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 TLE1Q04724 770 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 BEX5Q5H9J7 111 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 BOLLQ8N9W6 283 aaKnown RBP13.87□□□□□ -0.19
NFIX-210ENST00000588228 OR10J5Q8NHC4 309 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 RTN4IP1Q8WWV3 396 aaPredicted RBP13.87□□□□□ -0.19
NFIX-210ENST00000588228 PDCD10Q9BUL8 212 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 RAB18Q9NP72 206 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 SLC2A9Q9NRM0 540 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
NFIX-210ENST00000588228 SPTA1P02549 2419 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 TUBAL3A6NHL2 446 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 CCSO14618 274 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 CD8AP01732 235 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 RBMXP38159 391 aaKnown RBP13.86□□□□□ -0.19
NFIX-210ENST00000588228 IFITM2Q01629 132 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 ANKRD55Q3KP44 614 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 FAM209AQ5JX71 171 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 H1FOOQ8IZA3 346 aaPredicted RBP13.86□□□□□ -0.19
NFIX-210ENST00000588228 FAM185AQ8N0U4 392 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 ASCC1Q8N9N2 400 aaKnown RBP13.86□□□□□ -0.19
NFIX-210ENST00000588228 CCDC71LQ8N9Z2 235 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 GRPEL2Q8TAA5 225 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 PPP1R35Q8TAP8 253 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 FAM222BQ8WU58 562 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 GALNT14Q96FL9 552 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 COQ2Q96H96 371 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 KIRREL1Q96J84 757 aa13.86□□□□□ -0.19
NFIX-210ENST00000588228 TMEM246Q9BRR3 403 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms