RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PPP1R35Q8TAP8 253 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 RAB1CQ92928 201 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 DNTTIP1Q9H147 329 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 RIMS4Q9H426 269 aaPredicted RBP9.4□□□□□ -0.9
VMP1-207ENST00000588131 TENM4Q6N022 2769 aa9.4□□□□□ -0.91
VMP1-207ENST00000588131 MEIKINA0A087WXM9 373 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 MEX3AA1L020 520 aaKnown RBP9.39□□□□□ -0.91
VMP1-207ENST00000588131 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 RAB3DO95716 219 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 ZNF735P0CB33 412 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 HRH1P35367 487 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 GPR6P46095 362 aaPredicted RBP9.39□□□□□ -0.91
VMP1-207ENST00000588131 TMEM33P57088 247 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 PAX5Q02548 391 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 KCNJ8Q15842 424 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 SRSF7Q16629 238 aaKnown RBP eCLIP9.39□□□□□ -0.91
VMP1-207ENST00000588131 Q6ZS49 121 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 SLC36A1Q7Z2H8 476 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 OR56B4Q8NH76 319 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 TIMD4Q96H15 378 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 MED30Q96HR3 178 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 C7orf50Q9BRJ6 194 aaKnown RBP9.39□□□□□ -0.91
VMP1-207ENST00000588131 DCTN5Q9BTE1 182 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 FAM234AQ9H0X4 552 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 ZNF286AQ9HBT8 521 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 MBNL3Q9NUK0 354 aaKnown RBP9.39□□□□□ -0.91
VMP1-207ENST00000588131 KAAG1Q9UBP8 84 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 ANXA10Q9UJ72 324 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 TRAPPC2LQ9UL33 140 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 EDARQ9UNE0 448 aa9.39□□□□□ -0.91
VMP1-207ENST00000588131 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 ODAMA1E959 279 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 CENPXA8MT69 81 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 TRDCB7Z8K6 153 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 H7C1Q1 480 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 SDCBPO00560 298 aaPredicted RBP9.38□□□□□ -0.91
VMP1-207ENST00000588131 DVL1O14640 695 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 NDUFA2O43678 99 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 PTTG1O95997 202 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 AMY2AP04746 511 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 SCTP09683 121 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 PAX1P15863 534 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 CCR6P51684 374 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 ATP5J2P56134 94 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 P2RX3P56373 397 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 EDDM3BP56851 147 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 HLA-DRB3P79483 266 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 HERPUD1Q15011 391 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 OXA1LQ15070 435 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 HMGN3Q15651 99 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 CHRFAM7AQ494W8 412 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 RNASE10Q5GAN6 216 aaKnown RBP9.38□□□□□ -0.91
VMP1-207ENST00000588131 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 CENPSQ8N2Z9 138 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 MUC20Q8N307 709 aaPredicted RBP9.38□□□□□ -0.91
VMP1-207ENST00000588131 OR5AP2Q8NGF4 316 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 OR5D13Q8NGL4 314 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 OR13A1Q8NGR1 328 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 OR5H2Q8NGV7 314 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 UBALD1Q8TB05 177 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 PERPQ96FX8 193 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 SLC6A7Q99884 636 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 NARFLQ9H6Q4 476 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 MCUBQ9NWR8 336 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 SLC25A10Q9UBX3 287 aaPredicted RBP9.38□□□□□ -0.91
VMP1-207ENST00000588131 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
VMP1-207ENST00000588131 IGKV1-6A0A0C4DH72 117 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 NAP1L6A6NFF2 107 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 POM121CA8CG34 1229 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 VGLL3A8MV65 326 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 FABP7O15540 132 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 NDUFB3O43676 98 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 RPS2P15880 293 aaKnown RBP9.37□□□□□ -0.91
VMP1-207ENST00000588131 NDUFB7P17568 137 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 TBPP20226 339 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 GIFP27352 417 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 ERP29P30040 261 aaKnown RBP9.37□□□□□ -0.91
VMP1-207ENST00000588131 SLC6A1P30531 599 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
VMP1-207ENST00000588131 GLP1RP43220 463 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 PDLIM4P50479 330 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 TAS2R46P59540 309 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 ARPC4P59998 168 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 SEC61A1P61619 476 aaKnown RBP9.37□□□□□ -0.91
VMP1-207ENST00000588131 MEF2DQ14814 521 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 CDK10Q15131 360 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 PLA1AQ53H76 456 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 ACTBL2Q562R1 376 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 IGSF11Q5DX21 431 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 VAX1Q5SQQ9 334 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 ZNF782Q6ZMW2 699 aaPredicted RBP9.37□□□□□ -0.91
VMP1-207ENST00000588131 ZNF841Q6ZN19 808 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 MOB1BQ7L9L4 216 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 TCF23Q7RTU1 214 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 OR51S1Q8NGJ8 323 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 ENKURQ8TC29 256 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 MRGPRDQ8TDS7 321 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms