RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CCL3L1P16619 93 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 VEGFCP49767 419 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 EFNB2P52799 333 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 BPIFB3P59826 476 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 NCR3LG1Q68D85 454 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 BRICD5Q6PL45 260 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 METAP1DQ6UB28 335 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-204ENST00000586558 GAPTQ8N292 157 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 ZNF565Q8N9K5 539 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 DCSTAMPQ9H295 470 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 PLEKHJ1Q9NW61 149 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 ING3Q9NXR8 418 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 ZNF729A6NN14 1252 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-204ENST00000586558 SOCS1O15524 211 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 PAHP00439 452 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 FAM157CP0CG43 387 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 ERVFRD-1P60508 538 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 PLA2G7Q13093 441 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 DYNC1I2Q13409 638 aaKnown RBP15.72■□□□□ 0.11
DDX39A-204ENST00000586558 KLF17Q5JT82 389 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-204ENST00000586558 GPR157Q5UAW9 335 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 C6orf201Q7Z4U5 140 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 C11orf42Q8N5U0 333 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 RHBDL2Q9NX52 303 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 NUP50Q9UKX7 468 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 SPATA2Q9UM82 520 aa15.72■□□□□ 0.11
DDX39A-204ENST00000586558 SETD2Q9BYW2 2564 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-204ENST00000586558 TRAV40A0A0B4J280 105 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 UBE2QL1A1L167 161 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 CLPXO76031 633 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 MT-ND4P03905 459 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 GLP1RP43220 463 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 RORCP51449 518 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 GUCA2AQ02747 115 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 ARL6IP1Q15041 203 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 OR10R2Q8NGX6 335 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 NDNFQ8TB73 568 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 RAB3CQ96E17 227 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 SULT4A1Q9BR01 284 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 ATG5Q9H1Y0 275 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 HEXA-AS1Q9H8Q6 139 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 LINC00574Q9H8X3 128 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 SIRT7Q9NRC8 400 aa15.71■□□□□ 0.11
DDX39A-204ENST00000586558 NIPBLQ6KC79 2804 aaeCLIP15.7■□□□□ 0.1
DDX39A-204ENST00000586558 MEX3AA1L020 520 aaKnown RBP15.7■□□□□ 0.1
DDX39A-204ENST00000586558 RAB27BO00194 218 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 GZMHP20718 246 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 TMEM50BP56557 158 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 TRAT1Q6PIZ9 186 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 HEPN1Q6WQI6 88 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 Q6ZTK2 550 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 OR13A1Q8NGR1 328 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 ACOT12Q8WYK0 555 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 AP3S1Q92572 193 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 TNFRSF14Q92956 283 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 LHX4Q969G2 390 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 ISOC1Q96CN7 298 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 ARHGAP5-AS1Q96IT6 56 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 FAAP24Q9BTP7 215 aa15.7■□□□□ 0.1
DDX39A-204ENST00000586558 RIMS4Q9H426 269 aaPredicted RBP15.7■□□□□ 0.1
DDX39A-204ENST00000586558 NF1P21359 2839 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 CENPVL3A0A0U1RRI6 287 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 KBTBD11-OT1A0A1B0GTJ5 212 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 POM121CA8CG34 1229 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 CGB3P0DN86 165 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 CGB7P0DN87 165 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 IGHV1-8P0DP01 117 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 IGHV4-38-2P0DP08 117 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 HOXB4P17483 251 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-204ENST00000586558 EPHA1P21709 976 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 C6orf183Q5T699 404 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 ZNF554Q86TJ5 538 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 OR5H6Q8NGV6 325 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 SLC25A38Q96DW6 304 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 PECRQ9BY49 303 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 RAB9BQ9NP90 201 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 CALYQ9NYX4 217 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 TRAPPC2LQ9UL33 140 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 CEPT1Q9Y6K0 416 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 ZFHX3Q15911 3703 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 C2CD3Q4AC94 2353 aa15.69■□□□□ 0.1
DDX39A-204ENST00000586558 A0A0A6YYH2 397 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 IGHV1-69DA0A0B4J2H0 117 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 A6NJ64 397 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 SERPINE3A8MV23 424 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 RNASEK-C17orf49H0YIS7 233 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 H3BMQ9 156 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 ORC5O43913 435 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 IGHV1-69P01742 117 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 HIST1H1DP16402 221 aaKnown RBP15.68■□□□□ 0.1
DDX39A-204ENST00000586558 CDK2P24941 298 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 FPR2P25090 351 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 UBE2E1P51965 193 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 SPCS2Q15005 226 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 MOGAT2Q3SYC2 334 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 PLAC9Q5JTB6 97 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 OR52W1Q6IF63 320 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 C9orf139Q6ZV77 190 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 MOB1BQ7L9L4 216 aa15.68■□□□□ 0.1
DDX39A-204ENST00000586558 MRGPRDQ8TDS7 321 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms