RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 FOXE3Q13461 319 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 TMEM244Q5VVB8 128 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 TGIF2LXQ8IUE1 241 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 SBSPONQ8IVN8 264 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 FOXRED2Q8IWF2 684 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 TMEM104Q8NE00 496 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 OR5M8Q8NGP6 311 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 OR8U1Q8NH10 309 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 MYOZ3Q8TDC0 251 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 MRGPRDQ8TDS7 321 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 CIB1Q99828 191 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 HSPB9Q9BQS6 159 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 GABARAPL1Q9H0R8 117 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 RHOFQ9HBH0 211 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 ZNF736B4DX44 427 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-225ENST00000586385 AP4M1O00189 453 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 HSD17B6O14756 317 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 PAX5Q02548 391 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 GPR50Q13585 617 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 KIAA0141Q14154 515 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-225ENST00000586385 ATP6AP1Q15904 470 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 PAN3Q58A45 887 aaKnown RBP9.27□□□□□ -0.93
BRCA1-225ENST00000586385 ELP2Q6IA86 826 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 CNIH3Q8TBE1 160 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 HAVCR2Q8TDQ0 301 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 SLC7A6OSQ96CW6 309 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-225ENST00000586385 PELI1Q96FA3 418 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 NEK6Q9HC98 313 aa9.27□□□□□ -0.93
BRCA1-225ENST00000586385 LIN7CQ9NUP9 197 aaKnown RBP9.27□□□□□ -0.93
BRCA1-225ENST00000586385 ZNF256Q9Y2P7 627 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-225ENST00000586385 CCRL2O00421 344 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 ATP8B1O43520 1251 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 FAM107AO95990 144 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 IGHG4P01861 327 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 ELANEP08246 267 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 TMEM225BP0DP42 221 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 PSMB8P28062 276 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 MTNR1BP49286 362 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 CCR9P51686 369 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 BNIP1Q12981 228 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 KISS1Q15726 138 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 ZSCAN26Q16670 478 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 PIGYQ3MUY2 71 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 CXorf66Q5JRM2 361 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-225ENST00000586385 FAM220AQ7Z4H9 259 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 ZNF565Q8N9K5 539 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 OR13C3Q8NGS6 347 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 NR1H4Q96RI1 486 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-225ENST00000586385 ZCCHC4Q9H5U6 513 aa9.26□□□□□ -0.93
BRCA1-225ENST00000586385 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 LCE6AA0A183 80 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 NCBP2LA6PVI3 153 aaKnown RBP9.25□□□□□ -0.93
BRCA1-225ENST00000586385 G3V2T6 193 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 C15orf65H3BRN8 121 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 SLC16A6O15403 523 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 C21orf33P30042 268 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-225ENST00000586385 VHLP40337 213 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 TMED1Q13445 227 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 ZNF691Q5VV52 312 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 SLC16A12Q6ZSM3 486 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 AMIGO2Q86SJ2 522 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 MOB3BQ86TA1 216 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 FAM71E2Q8N5Q1 922 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 Q8NFD4 153 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 OR10A7Q8NGE5 316 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 OR8J1Q8NGP2 316 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 OR10K1Q8NGX5 313 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 OR10X1Q8NGY0 326 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 UBALD1Q8TB05 177 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 S1PR3Q99500 378 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 GABARAPL3Q9BY60 117 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 KLK15Q9H2R5 256 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
BRCA1-225ENST00000586385 I3L521 148 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 SLC31A2O15432 143 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 GAPDHP04406 335 aaKnown RBP9.24□□□□□ -0.93
BRCA1-225ENST00000586385 DBTP11182 482 aaKnown RBP9.24□□□□□ -0.93
BRCA1-225ENST00000586385 ATP6V1E1P36543 226 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 F2RL1P55085 397 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 ALKBH1Q13686 389 aaKnown RBP9.24□□□□□ -0.93
BRCA1-225ENST00000586385 IL13RA2Q14627 380 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 LPCAT4Q643R3 524 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 ZNF529Q6P280 563 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 ASCL4Q6XD76 172 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 OVCH2Q7RTZ1 564 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 PARP16Q8N5Y8 322 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 LINC00311Q8N616 119 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 CCDC197Q8NCU1 140 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 PXT1Q8NFP0 134 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 OR51A2Q8NGJ7 313 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 OR2T10Q8NGZ9 312 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 RTN4IP1Q8WWV3 396 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-225ENST00000586385 BARHL1Q9BZE3 327 aa9.24□□□□□ -0.93
BRCA1-225ENST00000586385 SMAD5-AS1Q9Y6J3 95 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms