RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ZNF773Q6PK81 442 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 HEPN1Q6WQI6 88 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 C16orf82Q7Z2V1 217 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 OR4X2Q8NGF9 303 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 OR5D18Q8NGL1 313 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 OR10AC1Q8NH08 325 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 CAPSLQ8WWF8 208 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 FCGR1BQ92637 280 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 CORO2AQ92828 525 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 LEAP2Q969E1 77 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 C10orf35Q96D05 121 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 RBMXL1Q96E39 390 aaKnown RBP9.21□□□□□ -0.94
LIG3-207ENST00000586119 COQ2Q96H96 371 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 COMMD4Q9H0A8 199 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 HMG20AQ9NP66 347 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 LSM2Q9Y333 95 aaKnown RBP9.21□□□□□ -0.94
LIG3-207ENST00000586119 PSMB11A5LHX3 300 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 E9PI62 339 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 SERPINA3P01011 423 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 NFYBP25208 207 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 THBS3P49746 956 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 NANOS3P60323 173 aaKnown RBP9.2□□□□□ -0.94
LIG3-207ENST00000586119 CD69Q07108 199 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 PDZK1IP1Q13113 114 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 GPR50Q13585 617 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 C8orf86Q6ZUL3 223 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 ZNF367Q7RTV3 350 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 RTN4RL2Q86UN3 420 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 OSR2Q8N2R0 312 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 OR51A4Q8NGJ6 313 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 OR5AK2Q8NH90 309 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 ZNF596Q8TC21 504 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 SMIM19Q96E16 107 aa9.2□□□□□ -0.94
LIG3-207ENST00000586119 PPIL3Q9H2H8 161 aaKnown RBP9.2□□□□□ -0.94
LIG3-207ENST00000586119 EXOSC4Q9NPD3 245 aaKnown RBP9.2□□□□□ -0.94
LIG3-207ENST00000586119 A0A087WXM4 84 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 TRGV10A0A0A0MS01 117 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 ODAMA1E959 279 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A18PA6NE21 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A16PA6NEW6 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A20PA6NIJ5 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A9PA6NNJ1 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A12PA8MX19 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A5PA8MXJ8 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 H3BUI4 141 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 TOR1AO14656 332 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 SH2D1BO14796 132 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A15PP0C7V4 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A13PP0C7W8 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A14PP0C7W9 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 FAM90A24PP0C7X0 464 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 CGB3P0DN86 165 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 CGB7P0DN87 165 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 LMO1P25800 156 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 CD34P28906 385 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 RPL23AP62750 156 aaKnown RBP9.19□□□□□ -0.94
LIG3-207ENST00000586119 MLLT11Q13015 90 aaPredicted RBP9.19□□□□□ -0.94
LIG3-207ENST00000586119 HNF4GQ14541 408 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 ATXN7L3Q14CW9 347 aaPredicted RBP9.19□□□□□ -0.94
LIG3-207ENST00000586119 MED22Q15528 200 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 LTC4SQ16873 150 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 KRBOX4Q5JUW0 171 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 DMKNQ6E0U4 476 aaPredicted RBP9.19□□□□□ -0.94
LIG3-207ENST00000586119 OR52W1Q6IF63 320 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 Q8IYB0 196 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 SPARTQ8N0X7 666 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 DNAAF1Q8NEP3 725 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 THRSPQ92748 146 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 AKR1E2Q96JD6 320 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 WWC2-AS2Q96NR7 200 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 B9D2Q9BPU9 175 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 ACOT13Q9NPJ3 140 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 TAS2R3Q9NYW6 316 aa9.19□□□□□ -0.94
LIG3-207ENST00000586119 HUWE1Q7Z6Z7 4374 aaKnown RBP9.18□□□□□ -0.94
LIG3-207ENST00000586119 TRAV39A0A0B4J263 110 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 A0A1W2PPE3 182 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 SLC33A1O00400 549 aaPredicted RBP9.18□□□□□ -0.94
LIG3-207ENST00000586119 KDM4BO94953 1096 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 ZFPL1O95159 310 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
LIG3-207ENST00000586119 LALBAP00709 142 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 ZNF44P15621 663 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 TPBGQ13641 420 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 YIF1BQ5BJH7 314 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 SPIN3Q5JUX0 258 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 UBE2UQ5VVX9 321 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 FAM53AQ6NSI3 398 aaPredicted RBP9.18□□□□□ -0.94
LIG3-207ENST00000586119 LCNL1Q6ZST4 164 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 OR2W3Q7Z3T1 314 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 MS4A15Q8N5U1 240 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 DRAM1Q8N682 238 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 OR56B4Q8NH76 319 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 GPR148Q8TDV2 347 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 UFD1Q92890 307 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 KIRREL1Q96J84 757 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 OPALINQ96PE5 141 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 GAL3ST2Q9H3Q3 398 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 VCX3AQ9NNX9 186 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
LIG3-207ENST00000586119 GLS2Q9UI32 602 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms