RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 RNF170Q96K19 258 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 OR8B4Q96RC9 309 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 TBX15Q96SF7 602 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 CHID1Q9BWS9 393 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 OSBPL10Q9BXB5 764 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 MAP1LC3CQ9BXW4 147 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 SRXN1Q9BYN0 137 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 CDC42EP4Q9H3Q1 356 aaKnown RBP1.76□□□□□ -2.13
VAPA-208ENST00000584796 CAB39LQ9H9S4 337 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 RETNQ9HD89 108 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 FBXO6Q9NRD1 293 aaPredicted RBP1.76□□□□□ -2.13
VAPA-208ENST00000584796 TREX1Q9NSU2 369 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 CBLN4Q9NTU7 201 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 MCUBQ9NWR8 336 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 MED29Q9NX70 200 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 GIN1Q9NXP7 522 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 NKIRAS1Q9NYS0 192 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 TREM2Q9NZC2 230 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 LGALS13Q9UHV8 139 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 MOKQ9UQ07 419 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 PLLPQ9Y342 182 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 CBY1Q9Y3M2 126 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 MMACHCQ9Y4U1 282 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 PKD1P98161 4303 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 DNAH11Q96DT5 4516 aa1.76□□□□□ -2.13
VAPA-208ENST00000584796 A0A0J9YW62 118 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 A0A1B0GW15 77 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 FAM231BA6NCW3 169 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 RNASEK-C17orf49H0YIS7 233 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 GOLGA8MH3BSY2 632 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 GOLGA8RI6L899 631 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 PSMD12O00232 456 aaPredicted RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 DCTN6O00399 190 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 TXNDC9O14530 226 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 ITGB1BP1O14713 200 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 SCAMP2O15127 329 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 MRPS12O15235 138 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 MGRN1O60291 552 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 CTNSO60931 367 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 NDUFS6O75380 124 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 IGHV2-5P01817 119 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 HBE1P02100 147 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 FGGP02679 453 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 CATP04040 527 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 SERPINA5P05154 406 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 SLC35G6P0C7Q6 338 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 TBPP20226 339 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 PSMB1P20618 241 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 SLC2A5P22732 501 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 IGHV1-2P23083 117 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 RPS3P23396 243 aaKnown RBP eCLIP1.75□□□□□ -2.134e-8■□□□□ 10.8
VAPA-208ENST00000584796 IVDP26440 423 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 PSMB6P28072 239 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 CD40LGP29965 261 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 PPP1R2P41236 205 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 RPL29P47914 159 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 GSSP48637 474 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 FABP6P51161 128 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 GPM6AP51674 278 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 BLVRAP53004 296 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 CDKN2DP55273 166 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 WNT4P56705 351 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 UBE2MP61081 183 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 ATP6V0D1P61421 351 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 STXBP1P61764 594 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 STX5Q13190 355 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 SLAMF1Q13291 335 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 DGCR6Q14129 220 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 SERTAD2Q14140 314 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 GNA13Q14344 377 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 KIAA0040Q15053 153 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 TMED2Q15363 201 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 SLC9A3R2Q15599 337 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 GABRA6Q16445 453 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 NRF1Q16656 503 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 TRMT5Q32P41 509 aaKnown RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 SPRNQ5BIV9 151 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 ANKRD22Q5VYY1 191 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 TFAP2EQ6VUC0 442 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 ZNF621Q6ZSS3 439 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 ABHD12BQ7Z5M8 362 aaPredicted RBP1.75□□□□□ -2.13
VAPA-208ENST00000584796 CYP4Z1Q86W10 505 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 PLCZ1Q86YW0 608 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 NRMQ8IXM6 262 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 MUC15Q8N387 334 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 FTMTQ8N4E7 242 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 WDR31Q8NA23 367 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR2M3Q8NG83 312 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR1J4Q8NGS1 313 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR6K6Q8NGW6 343 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR6K3Q8NGY3 331 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR6N2Q8NGY6 317 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR2G2Q8NGZ5 317 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR5B3Q8NH48 314 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 OR56B4Q8NH76 319 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 MCOLN3Q8TDD5 553 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 RNF138Q8WVD3 245 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 EEF1AKMT1Q8WVE0 214 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 GTF2H4Q92759 462 aa1.75□□□□□ -2.13
VAPA-208ENST00000584796 CDKL2Q92772 493 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms