RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 KIRREL1Q96J84 757 aa13.11□□□□□ -0.31
CCDC57-219ENST00000584717 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
CCDC57-219ENST00000584717 MCRIP2Q9BUT9 160 aaKnown RBP13.11□□□□□ -0.31
CCDC57-219ENST00000584717 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
CCDC57-219ENST00000584717 RPL36Q9Y3U8 105 aaKnown RBP13.11□□□□□ -0.31
CCDC57-219ENST00000584717 AMMECR1Q9Y4X0 333 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-219ENST00000584717 KBTBD11-OT1A0A1B0GTJ5 212 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 A0A1W2PPI3 338 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 MAGEA13PA6NCF6 341 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 DEGS1O15121 323 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
CCDC57-219ENST00000584717 TMEM11P17152 192 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 DIAPH2-AS1Q14236 149 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 HNF4GQ14541 408 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 LTC4SQ16873 150 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 THNSL2Q86YJ6 484 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 C5orf56Q8N8D9 126 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 BPIFB6Q8NFQ5 453 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 PCDHB16Q9NRJ7 776 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 CALYQ9NYX4 217 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 OR6C3Q9NZP0 311 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
CCDC57-219ENST00000584717 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 ISG15P05161 165 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 MYCNOSP40205 109 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 GNG10P50151 68 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 CDK5R1Q15078 307 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 KCTD21Q4G0X4 260 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 UNQ9370/PRO34162Q6UXP9 181 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 OR13A1Q8NGR1 328 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 APH1BQ8WW43 257 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 P2RX4Q99571 388 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 KIF25Q9UIL4 384 aa13.09□□□□□ -0.31
CCDC57-219ENST00000584717 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 EFCAB10A6NFE3 127 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 J3QR06 171 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 MT-ND2P03891 347 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.32
CCDC57-219ENST00000584717 HTR1AP08908 422 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 CGB3P0DN86 165 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 CGB7P0DN87 165 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 CRHBPP24387 322 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 RAB25P57735 213 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 DGCR2P98153 550 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 DCTN2Q13561 401 aaKnown RBP13.08□□□□□ -0.32
CCDC57-219ENST00000584717 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 RHOFQ9HBH0 211 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 ZFP57Q9NU63 452 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 IDI2-AS1Q9NZ38 188 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 CNOT2Q9NZN8 540 aaKnown RBP13.08□□□□□ -0.32
CCDC57-219ENST00000584717 AASSQ9UDR5 926 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 PSG11Q9UQ72 335 aa13.08□□□□□ -0.32
CCDC57-219ENST00000584717 FGF16O43320 207 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 MRPS14O60783 128 aaKnown RBP13.07□□□□□ -0.32
CCDC57-219ENST00000584717 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 HCKP08631 526 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 GABARAPL2P60520 117 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 SLC35B1P78383 322 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 MADCAM1Q13477 382 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 PAN3Q58A45 887 aaKnown RBP13.07□□□□□ -0.32
CCDC57-219ENST00000584717 LAIR2Q6ISS4 152 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 FDX2Q6P4F2 183 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 SLC35E3Q7Z769 313 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 ZNF695Q8IW36 515 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 ZNF565Q8N9K5 539 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 OR51T1Q8NGJ9 327 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 ZCCHC4Q9H5U6 513 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 PSORS1C1Q9UIG5 152 aa13.07□□□□□ -0.32
CCDC57-219ENST00000584717 DAPL1A0PJW8 107 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 LINC01548A6NM66 108 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 PTGES3LE9PB15 166 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 J3QLW9 94 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 IL1AP01583 271 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 IGHG2P01859 326 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 ZNF19P17023 458 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 SLC6A1P30531 599 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 RAB7AP51149 207 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 LUMP51884 338 aaPredicted RBP13.06□□□□□ -0.32
CCDC57-219ENST00000584717 ZP1P60852 638 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 SMN1Q16637 294 aaKnown RBP13.06□□□□□ -0.32
CCDC57-219ENST00000584717 FOXRED2Q8IWF2 684 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 STPG2Q8N412 459 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 MRGPRDQ8TDS7 321 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 GGHQ92820 318 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 DUSP21Q9H596 190 aa13.06□□□□□ -0.32
CCDC57-219ENST00000584717 MRPS18AQ9NVS2 196 aaKnown RBP13.06□□□□□ -0.32
CCDC57-219ENST00000584717 A0A087WXM4 84 aa13.05□□□□□ -0.32
CCDC57-219ENST00000584717 TRAV39A0A0B4J263 110 aa13.05□□□□□ -0.32
CCDC57-219ENST00000584717 TRAV24A0A0B4J272 114 aa13.05□□□□□ -0.32
CCDC57-219ENST00000584717 A0A1W2PPE3 182 aa13.05□□□□□ -0.32
CCDC57-219ENST00000584717 OR4C45A6NMZ5 311 aa13.05□□□□□ -0.32
CCDC57-219ENST00000584717 J3QRE1 110 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms