RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ZFAND5	O76080	213 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CRYBA1	P05813	215 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SLC6A9	P48067	706 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PDZK1IP1	Q13113	114 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MEF2D	Q14814	521 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SURF2	Q15527	256 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM244	Q5VVB8	128 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SVBP	Q8N300	66 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SLC22A24	Q8N4F4	322 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LPAR5	Q9H1C0	372 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SLC17A5	Q9NRA2	495 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CEP295	Q9C0D2	2601 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	IGKV1D-8	A0A087WSZ0	117 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063		M0QZ24	198 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	WIPF1	O43516	503 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SLC25A4	P12235	298 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TPT1	P13693	172 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	AMY2B	P19961	511 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF121	P58317	390 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MZT1	Q08AG7	82 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF239	Q16600	458 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SP6	Q3SY56	376 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C1orf100	Q5SVJ3	147 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C20orf196	Q8IYI0	205 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR5D14	Q8NGL3	314 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR1L6	Q8NGR2	347 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RXFP4	Q8TDU9	374 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DYRK2	Q92630	601 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PIGT	Q969N2	578 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ISOC2	Q96AB3	205 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CNTNAP3B	Q96NU0	1288 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PLEKHA2	Q9HB19	425 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CYTL1	Q9NRR1	136 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	EHF	Q9NZC4	300 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C14orf166	Q9Y224	244 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DOCK7	Q96N67	2140 aa		10.06	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DCHS1	Q96JQ0	3298 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MEGF11	A6BM72	1044 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LIPT2	A6NK58	231 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUS4L	O95620	317 aa	Known RBP	10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	UMOD	P07911	640 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CD82	P27701	267 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LPAR6	P43657	344 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR3A2	P47893	321 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MRPL14	Q6P1L8	145 aa	Known RBP	10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	WFDC8	Q8IUA0	241 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR8B12	Q8NGG6	310 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR51T1	Q8NGJ9	327 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR5L2	Q8NGL0	311 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TERB2	Q8NHR7	220 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NRGN	Q92686	78 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LSM5	Q9Y4Y9	91 aa	Known RBP	10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF407	Q9C0G0	2248 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ANKUB1	A6NFN9	424 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C9orf172	C9J069	976 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	KLF7	O75840	302 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RPLP1	P05386	114 aa	Known RBP	10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CD59	P13987	128 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FST	P19883	344 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SPINK2	P20155	84 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	GABRR1	P24046	479 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PTGDS	P41222	190 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RAB9A	P51151	201 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RRAD	P55042	308 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CLRN1	P58418	232 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RAB5B	P61020	215 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SUPT4H1	P63272	117 aa	Known RBP	10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF345	Q14585	488 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	BSX	Q3C1V8	233 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TSPO2	Q5TGU0	170 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM59	Q9BXS4	323 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RFNG	Q9Y644	331 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LHFPL6	Q9Y693	200 aa		10.05	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NSG1	A0A0A6YYJ2	146 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF878	C9JN71	531 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PROB1	E7EW31	1015 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MKRN2OS	H3BPM6	223 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C1QL1	O75973	258 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ACP1	P24666	158 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TIMP3	P35625	211 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CFHR2	P36980	270 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FOLR3	P41439	243 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	QRFP	P83859	136 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RIPPLY1	Q0D2K3	151 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MST1L	Q2TV78	715 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C3orf36	Q3SXR2	165 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LYPD6	Q86Y78	171 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR13G1	Q8NGZ3	307 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RNF133	Q8WVZ7	376 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ARL11	Q969Q4	196 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	REEP6	Q96HR9	211 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	UQCC1	Q9NVA1	299 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RNF150	Q9ULK6	438 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	HS3ST3B1	Q9Y662	390 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DIDO1	Q9BTC0	2240 aa	Known RBP	10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C1QTNF9B	B2RNN3	333 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	KLK10	O43240	276 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CDC14B	O60729	498 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ACTL6B	O94805	426 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms