RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 RBMX2Q9Y388 322 aaKnown RBP1.61□□□□□ -2.15
PPP4R1-227ENST00000583988 H3BP45 60 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 DENRO43583 198 aaKnown RBP1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 ENSAO43768 121 aaKnown RBP1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 CBR1P16152 277 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 PYCR1P32322 319 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 HSPA13P48723 471 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 RAB25P57735 213 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 XIAPP98170 497 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 PRDX1Q06830 199 aaKnown RBP1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 BSXQ3C1V8 233 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 FBXO48Q5FWF7 155 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 OLIG3Q7RTU3 272 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 C10orf107Q8IVU9 208 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 KRTCAP2Q8N6L1 136 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 TRIML2Q8N7C3 387 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 Q8NDZ9 215 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 FAM45AQ8TCE6 357 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 C19orf60Q96EN9 201 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 REEP6Q96HR9 211 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 OR8B2Q96RD0 313 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 EBPLQ9BY08 206 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 BCL2L14Q9BZR8 327 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 POMPQ9Y244 141 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 LINC00588Q9Y4M8 146 aa1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 COL5A3P25940 1745 aaPredicted RBP1.6□□□□□ -2.15
PPP4R1-227ENST00000583988 ATAD5Q96QE3 1844 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 TRAV8-2A0A0B4J237 113 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 A6NED7 52 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 SDHAF1A6NFY7 115 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 FABP7O15540 132 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 SHOX2O60902 331 aaPredicted RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 IGKV5-2P06315 115 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 TPM1P09493 284 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 TNNC1P63316 161 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 PAFAH1B3Q15102 231 aaKnown RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 ZNF322Q6U7Q0 402 aaPredicted RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 DGAT2L6Q6ZPD8 337 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 CDRT4Q8N9R6 151 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 KCTD4Q8WVF5 259 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 IFT81Q8WYA0 676 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 ZNF75CPQ92670 426 aaPredicted RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 CCDC124Q96CT7 223 aaKnown RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 HBEGFQ99075 208 aa1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 MRPL16Q9NX20 251 aaKnown RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 NXT1Q9UKK6 140 aaKnown RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 SAMHD1Q9Y3Z3 626 aaKnown RBP1.59□□□□□ -2.15
PPP4R1-227ENST00000583988 PLXNA3P51805 1871 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 NUP153P49790 1475 aaKnown RBP1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 LECT2O14960 151 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 FADS2O95864 444 aaKnown RBP1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 AKR1C4P17516 323 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 MAGEA3P43357 314 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 LAIR2Q6ISS4 152 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF767PQ75MW2 155 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 LRRC6Q86X45 466 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 OR2AE1Q8NHA4 323 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 HIST1H2BAQ96A08 127 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 ARL6Q9H0F7 186 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 TUBA4BQ9H853 241 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 TMEM106BQ9NUM4 274 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 VPREB3Q9UKI3 123 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 STK38LQ9Y2H1 464 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 PHLDA3Q9Y5J5 127 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 KIAA0232Q92628 1395 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 RAB3GAP2Q9H2M9 1393 aa1.58□□□□□ -2.16
PPP4R1-227ENST00000583988 SHANK3Q9BYB0 1731 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 STRCP1A6NGW2 1772 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 LOC100506127A0A0U1RQW1 187 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 A0A1B0GW15 77 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 C17orf51A8MQB3 221 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 J3QKU1 62 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 TP53I11O14683 189 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 LTAP01374 205 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF22P17026 224 aaPredicted RBP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 CSRP1P21291 193 aaKnown RBP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 EVI2BP34910 448 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 TMED1Q13445 227 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF181Q2M3W8 571 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 Q3ZCU0 254 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 SSX7Q7RTT5 188 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 OR10D4PQ8NGN7 298 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 OR4K13Q8NH42 304 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 SPPL2BQ8TCT7 592 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 GPR119Q8TDV5 335 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 KLF6Q99612 283 aaPredicted RBP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 SIKE1Q9BRV8 207 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 ALX4Q9H161 411 aaPredicted RBP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 HAUS4Q9H6D7 363 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 SLC23A2Q9UGH3 650 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 TBL2Q9Y4P3 447 aaKnown RBP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 ADAMTS7Q9UKP4 1686 aa1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 TRPM3Q9HCF6 1732 aaPredicted RBP1.57□□□□□ -2.16
PPP4R1-227ENST00000583988 A0A1B0GTI1 187 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 ZNF879B4DU55 563 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 FGF16O43320 207 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 EEF1E1O43324 174 aaKnown RBP1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 UGT2B11O75310 529 aa1.56□□□□□ -2.16
PPP4R1-227ENST00000583988 LDOC1O95751 146 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms