RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CHST6Q9GZX3 395 aa9.72□□□□□ -0.85
TOP3A-215ENST00000583328 MOB4Q9Y3A3 225 aa9.72□□□□□ -0.85
TOP3A-215ENST00000583328 SIRT4Q9Y6E7 314 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-215ENST00000583328 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
TOP3A-215ENST00000583328 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
TOP3A-215ENST00000583328 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.85
TOP3A-215ENST00000583328 FAM230AA0A1W2PPH8 454 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 FAM172BPA6NC97 362 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 A6NIN4 97 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 SERPINE3A8MV23 424 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 H3BSH0 61 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 TOR1AO14656 332 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 CD1AP06126 327 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 FAM106CPP0CH98 169 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 MED22Q15528 200 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 TPTE2P1Q5T6R2 138 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 PRAMEF5Q5TYX0 476 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 ZFP41Q8N8Y5 198 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 OR5M8Q8NGP6 311 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 OR10AC1Q8NH08 325 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 SLAMF9Q96A28 289 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 CREB3L1Q96BA8 519 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 RAX2Q96IS3 184 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 CEP19Q96LK0 163 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 GLS2Q9UI32 602 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 LINC00527Q9UJ94 153 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 SLC7A11Q9UPY5 501 aa9.71□□□□□ -0.86
TOP3A-215ENST00000583328 F8VVB4 439 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 F8VWA3 439 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 TNFAIP8O95379 198 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 HAND1O96004 215 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF20P17024 532 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 CELP19835 753 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 CDK2P24941 298 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 MAP2K4P45985 399 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 CCDC144NLQ6NUI1 221 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF773Q6PK81 442 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF367Q7RTV3 350 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 COMMD1Q8N668 190 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 OR51A4Q8NGJ6 313 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 OR13C3Q8NGS6 347 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 GPR148Q8TDV2 347 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 TSEN15Q8WW01 171 aaKnown RBP9.7□□□□□ -0.86
TOP3A-215ENST00000583328 PP6455Q8WZ26 134 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 RGP1Q92546 391 aaPredicted RBP9.7□□□□□ -0.86
TOP3A-215ENST00000583328 GHSRQ92847 366 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 PGLYRP3Q96LB9 341 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 CHST5Q9GZS9 411 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 GAL3ST2Q9H3Q3 398 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 ISYNA1Q9NPH2 558 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 ACOT13Q9NPJ3 140 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 MTCH1Q9NZJ7 389 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 DHDHQ9UQ10 334 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 UBE2J1Q9Y385 318 aaPredicted RBP9.7□□□□□ -0.86
TOP3A-215ENST00000583328 SMAD5-AS1Q9Y6J3 95 aa9.7□□□□□ -0.86
TOP3A-215ENST00000583328 PNMA8CA0A1B0GUJ8 204 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 SEC14L6B5MCN3 397 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 BUB1B-PAK6H3BSN5 160 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 MGST3O14880 152 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 PSPNO60542 156 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 GATBO75879 557 aaKnown RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 LY86O95711 162 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 SERPINA3P01011 423 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 IGLV1-47P01700 117 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 DUSP1P28562 367 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 ERP29P30040 261 aaKnown RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 PRRX1P54821 245 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 P2RX3P56373 397 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 MLLT11Q13015 90 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 GPR50Q13585 617 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 RBM39Q14498 530 aaKnown RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 HLA-DRB5Q30154 266 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 YIF1BQ5BJH7 314 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 LCNL1Q6ZST4 164 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 HUWE1Q7Z6Z7 4374 aaKnown RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 THNSL2Q86YJ6 484 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 SPARTQ8N0X7 666 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 EMG1Q92979 244 aaKnown RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 FGGYQ96C11 551 aa9.69□□□□□ -0.86
TOP3A-215ENST00000583328 ADAT3Q96EY9 351 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
TOP3A-215ENST00000583328 TRGV10A0A0A0MS01 117 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 TRBV5-5A0A0J9YX44 114 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 OOSP1A8MZH6 123 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 LY6LH3BQJ8 138 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 CD2P06729 351 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 OCM2P0CE71 109 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 HSMCR30P0CW71 290 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 TPBGQ13641 420 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 HES1Q14469 280 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 ZFAND6Q6FIF0 208 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 TEX38Q6PEX7 206 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 HEPN1Q6WQI6 88 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 SLC25A26Q70HW3 274 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 UTS2BQ765I0 119 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 SLC35E3Q7Z769 313 aa9.68□□□□□ -0.86
TOP3A-215ENST00000583328 FOXRED2Q8IWF2 684 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms