RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	RNF122	Q9H9V4	155 aa		6.28	□□□□□ -1.4
NF1-222	ENST00000582892	ZNF224	Q9NZL3	707 aa		6.28	□□□□□ -1.4
NF1-222	ENST00000582892	ATPIF1	Q9UII2	106 aa		6.28	□□□□□ -1.4
NF1-222	ENST00000582892	COL7A1	Q02388	2944 aa		6.28	□□□□□ -1.4
NF1-222	ENST00000582892	RYR2	Q92736	4967 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892		A0A0A6YYD4	124 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	IGKV1-9	A0A0C4DH69	117 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ZSCAN5B	A6NJL1	495 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	VWC2L	B2RUY7	222 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892		F8VVB4	439 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892		F8VWA3	439 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	TEX46	H3BTG2	121 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	RER1	O15258	196 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	SFT2D2	O95562	160 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	TSPAN15	O95858	294 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	MPIG6B	O95866	241 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	HCK	P08631	526 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	GNB3	P16520	340 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	PRKACB	P22694	351 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	CPT2	P23786	658 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	PSMB6	P28072	239 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	CDA	P32320	146 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	SFTPD	P35247	375 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	SRP14	P37108	136 aa	Known RBP	6.27	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM50B	P56557	158 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	KISS1	Q15726	138 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	MICB	Q29980	383 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	KRTAP27-1	Q3LI81	207 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	NRN1L	Q496H8	165 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	AWAT1	Q58HT5	328 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	PLAC9	Q5JTB6	97 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	OR2A2	Q6IF42	318 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ALKAL2	Q6UX46	152 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	DRAM2	Q6UX65	266 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ASCL4	Q6XD76	172 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	COMMD2	Q86X83	199 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF100	Q8IYN0	542 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	GPR137C	Q8N3F9	429 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	GVQW1	Q8N7I0	195 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	INO80E	Q8NBZ0	244 aa	Predicted RBP	6.27	□□□□□ -1.41
NF1-222	ENST00000582892	PXT1	Q8NFP0	134 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	OR5H2	Q8NGV7	314 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	OR1S1	Q8NH92	325 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	COQ8A	Q8NI60	647 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	PPP1R1C	Q8WVI7	109 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ST8SIA4	Q92187	359 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	EMG1	Q92979	244 aa	Known RBP	6.27	□□□□□ -1.41
NF1-222	ENST00000582892	CMBL	Q96DG6	245 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	CCDC140	Q96MF4	163 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	GPER1	Q99527	375 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	VRK1	Q99986	396 aa	Predicted RBP	6.27	□□□□□ -1.41
NF1-222	ENST00000582892	GAL3ST1	Q99999	423 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	PDCD10	Q9BUL8	212 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	RGCC	Q9H4X1	137 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ZMAT3	Q9HA38	289 aa	Known RBP	6.27	□□□□□ -1.41
NF1-222	ENST00000582892	DECR2	Q9NUI1	292 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	CISD1	Q9NZ45	108 aa	Known RBP	6.27	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF319	Q9P2F9	582 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	DNAJB11	Q9UBS4	358 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	DKKL1	Q9UK85	242 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	HSF4	Q9ULV5	492 aa		6.27	□□□□□ -1.41
NF1-222	ENST00000582892	RAB19	A4D1S5	217 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	LRP5L	A4QPB2	252 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	FAM157A	C9JC47	383 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892		M0R135	149 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	SOCS1	O15524	211 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	CRTAP	O75718	401 aa	Predicted RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	PET100	P0DJ07	73 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	AMY2B	P19961	511 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	DTYMK	P23919	212 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	OR3A4P	P47883	348 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	ERVFRD-1	P60508	538 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	PCBD1	P61457	104 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	EIF5A	P63241	154 aa	Known RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	SCRN3	Q0VDG4	424 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	CNN3	Q15417	329 aa	Known RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	SGCA	Q16586	387 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	PAN3	Q58A45	887 aa	Known RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	RAET1L	Q5VY80	246 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	CARD17	Q5XLA6	110 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	ABLIM2	Q6H8Q1	611 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	OR52W1	Q6IF63	320 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	CRIP3	Q6Q6R5	217 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	ZIC4	Q8N9L1	334 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM104	Q8NE00	496 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	OR5AP2	Q8NGF4	316 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	MRPS24	Q96EL2	167 aa	Known RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF799	Q96GE5	643 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	FAM71F1	Q96KD3	344 aa	Predicted RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	LYZL4	Q96KX0	146 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	JMJD8	Q96S16	334 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	S100A13	Q99584	98 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	ARPC5L	Q9BPX5	153 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	NICN1	Q9BSH3	213 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	PECR	Q9BY49	303 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	KRTAP17-1	Q9BYP8	105 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	ULBP2	Q9BZM5	246 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	CHMP1A	Q9HD42	196 aa	Predicted RBP	6.26	□□□□□ -1.41
NF1-222	ENST00000582892	PCDHB16	Q9NRJ7	776 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	IL36G	Q9NZH8	169 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms